Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC084121.4-201ENST00000641598 221 ntBASIC17.45■□□□□ 0.38
USP46P62068 AF228730.8-201ENST00000642140 221 ntBASIC17.45■□□□□ 0.38
USP46P62068 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
USP46P62068 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
USP46P62068 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
USP46P62068 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
USP46P62068 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.45■□□□□ 0.38
USP46P62068 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USP46P62068 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.45■□□□□ 0.38
USP46P62068 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
USP46P62068 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
USP46P62068 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 AL118508.1-201ENST00000613502 2345 ntBASIC17.44■□□□□ 0.38
USP46P62068 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
USP46P62068 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.44■□□□□ 0.38
USP46P62068 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
USP46P62068 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.44■□□□□ 0.38
USP46P62068 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
USP46P62068 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.44■□□□□ 0.38
USP46P62068 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
USP46P62068 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
USP46P62068 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.44■□□□□ 0.38
USP46P62068 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.44■□□□□ 0.38
USP46P62068 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.44■□□□□ 0.38
USP46P62068 RBPMS2P1-201ENST00000437762 623 ntBASIC17.44■□□□□ 0.38
USP46P62068 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
USP46P62068 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
USP46P62068 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.44■□□□□ 0.38
USP46P62068 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 Z92544.3-201ENST00000624747 417 ntBASIC17.44■□□□□ 0.38
USP46P62068 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.44■□□□□ 0.38
USP46P62068 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.44■□□□□ 0.38
USP46P62068 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
USP46P62068 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
USP46P62068 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.44■□□□□ 0.38
USP46P62068 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 AC105020.1-201ENST00000435356 2205 ntBASIC17.44■□□□□ 0.38
USP46P62068 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
USP46P62068 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.44■□□□□ 0.38
USP46P62068 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP46P62068 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.44■□□□□ 0.38
USP46P62068 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
USP46P62068 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
USP46P62068 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
USP46P62068 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP46P62068 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP46P62068 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
USP46P62068 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
USP46P62068 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.43■□□□□ 0.38
USP46P62068 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
USP46P62068 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP46P62068 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP46P62068 MIR346-201ENST00000362234 95 ntBASIC17.43■□□□□ 0.38
USP46P62068 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.43■□□□□ 0.38
USP46P62068 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP46P62068 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.43■□□□□ 0.38
USP46P62068 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.43■□□□□ 0.38
USP46P62068 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.43■□□□□ 0.38
USP46P62068 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.43■□□□□ 0.38
USP46P62068 AC025678.2-201ENST00000562061 970 ntBASIC17.43■□□□□ 0.38
USP46P62068 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP46P62068 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.43■□□□□ 0.38
USP46P62068 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.43■□□□□ 0.38
USP46P62068 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
USP46P62068 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.43■□□□□ 0.38
USP46P62068 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
USP46P62068 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
USP46P62068 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
USP46P62068 AL512652.2-201ENST00000625156 1716 ntBASIC17.43■□□□□ 0.38
USP46P62068 AL603756.1-201ENST00000606511 2163 ntBASIC17.43■□□□□ 0.38
USP46P62068 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP46P62068 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.43■□□□□ 0.38
USP46P62068 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP46P62068 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP46P62068 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
USP46P62068 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP46P62068 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms