Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DEFA3P59666 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DEFA3P59666 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
DEFA3P59666 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
DEFA3P59666 AC016027.1-202ENST00000607927 1699 ntBASIC14.58□□□□□ -0.07
DEFA3P59666 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
DEFA3P59666 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
DEFA3P59666 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.58□□□□□ -0.08
DEFA3P59666 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
DEFA3P59666 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
DEFA3P59666 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.58□□□□□ -0.08
DEFA3P59666 RPS2P4-201ENST00000476944 856 ntBASIC14.58□□□□□ -0.08
DEFA3P59666 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.58□□□□□ -0.08
DEFA3P59666 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.58□□□□□ -0.08
DEFA3P59666 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.58□□□□□ -0.08
DEFA3P59666 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.58□□□□□ -0.08
DEFA3P59666 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.58□□□□□ -0.08
DEFA3P59666 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.58□□□□□ -0.08
DEFA3P59666 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.58□□□□□ -0.08
DEFA3P59666 AC069544.1-201ENST00000609399 999 ntBASIC14.58□□□□□ -0.08
DEFA3P59666 AL353708.3-201ENST00000610272 989 ntBASIC14.58□□□□□ -0.08
DEFA3P59666 AC005837.3-201ENST00000612163 286 ntBASIC14.58□□□□□ -0.08
DEFA3P59666 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 CICP23-201ENST00000605013 2741 ntBASIC14.58□□□□□ -0.08
DEFA3P59666 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.58□□□□□ -0.08
DEFA3P59666 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
DEFA3P59666 AC020658.6-201ENST00000623564 1870 ntBASIC14.58□□□□□ -0.08
DEFA3P59666 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 LINC00895-201ENST00000629028 1637 ntBASIC14.58□□□□□ -0.08
DEFA3P59666 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.58□□□□□ -0.08
DEFA3P59666 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.58□□□□□ -0.08
DEFA3P59666 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DEFA3P59666 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.57□□□□□ -0.08
DEFA3P59666 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.57□□□□□ -0.08
DEFA3P59666 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
DEFA3P59666 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
DEFA3P59666 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
DEFA3P59666 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.57□□□□□ -0.08
DEFA3P59666 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
DEFA3P59666 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
DEFA3P59666 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.57□□□□□ -0.08
DEFA3P59666 WWOX-216ENST00000569818 525 ntBASIC14.57□□□□□ -0.08
DEFA3P59666 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.57□□□□□ -0.08
DEFA3P59666 AP000692.2-201ENST00000608391 879 ntBASIC14.57□□□□□ -0.08
DEFA3P59666 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
DEFA3P59666 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 AC232323.1-201ENST00000540724 2099 ntBASIC14.57□□□□□ -0.08
DEFA3P59666 REXO1L5P-201ENST00000622260 2098 ntBASIC14.57□□□□□ -0.08
DEFA3P59666 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.57□□□□□ -0.08
DEFA3P59666 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.57□□□□□ -0.08
DEFA3P59666 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.57□□□□□ -0.08
DEFA3P59666 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.57□□□□□ -0.08
DEFA3P59666 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.57□□□□□ -0.08
DEFA3P59666 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
DEFA3P59666 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.57□□□□□ -0.08
DEFA3P59666 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.57□□□□□ -0.08
DEFA3P59666 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.57□□□□□ -0.08
DEFA3P59666 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
DEFA3P59666 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.57□□□□□ -0.08
DEFA3P59666 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DEFA3P59666 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.56□□□□□ -0.08
DEFA3P59666 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA3P59666 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA3P59666 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA3P59666 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DEFA3P59666 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.56□□□□□ -0.08
DEFA3P59666 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
DEFA3P59666 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms