Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 BX842568.4-201ENST00000421222 227 ntBASIC15.25■□□□□ 0.03
CLDN20P56880 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.25■□□□□ 0.03
CLDN20P56880 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN20P56880 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN20P56880 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN20P56880 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.25■□□□□ 0.03
CLDN20P56880 AL513480.1-201ENST00000451731 511 ntBASIC15.25■□□□□ 0.03
CLDN20P56880 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.25■□□□□ 0.03
CLDN20P56880 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN20P56880 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN20P56880 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN20P56880 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CLDN20P56880 AC092865.5-201ENST00000545435 363 ntBASIC15.25■□□□□ 0.03
CLDN20P56880 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN20P56880 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLDN20P56880 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN20P56880 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN20P56880 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN20P56880 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN20P56880 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
CLDN20P56880 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CLDN20P56880 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN20P56880 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN20P56880 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN20P56880 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN20P56880 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 AC025580.3-201ENST00000617932 1424 ntBASIC15.25■□□□□ 0.03
CLDN20P56880 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN20P56880 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN20P56880 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CLDN20P56880 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN20P56880 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN20P56880 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN20P56880 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CLDN20P56880 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN20P56880 AL136379.1-201ENST00000623471 2642 ntBASIC15.24■□□□□ 0.03
CLDN20P56880 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLDN20P56880 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CLDN20P56880 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLDN20P56880 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLDN20P56880 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CLDN20P56880 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CLDN20P56880 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CLDN20P56880 AC124947.2-201ENST00000547118 1133 ntBASIC15.24■□□□□ 0.03
CLDN20P56880 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN20P56880 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN20P56880 AC002347.1-201ENST00000569543 541 ntBASIC15.24■□□□□ 0.03
CLDN20P56880 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CLDN20P56880 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.24■□□□□ 0.03
CLDN20P56880 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CLDN20P56880 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN20P56880 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CLDN20P56880 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN20P56880 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CLDN20P56880 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CLDN20P56880 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN20P56880 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN20P56880 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN20P56880 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN20P56880 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN20P56880 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN20P56880 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CLDN20P56880 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN20P56880 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN20P56880 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN20P56880 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN20P56880 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN20P56880 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.23■□□□□ 0.03
CLDN20P56880 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.23■□□□□ 0.03
CLDN20P56880 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN20P56880 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms