Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
KCNQ4P56696 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ4P56696 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ4P56696 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
KCNQ4P56696 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.87■□□□□ 0.93
KCNQ4P56696 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNQ4P56696 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ4P56696 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
KCNQ4P56696 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ4P56696 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ4P56696 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNQ4P56696 KRT43P-201ENST00000434019 910 ntBASIC20.87■□□□□ 0.93
KCNQ4P56696 ZNF767P-206ENST00000513792 565 ntBASIC20.87■□□□□ 0.93
KCNQ4P56696 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
KCNQ4P56696 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
KCNQ4P56696 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNQ4P56696 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.87■□□□□ 0.93
KCNQ4P56696 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNQ4P56696 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.87■□□□□ 0.93
KCNQ4P56696 RARRES2P5-201ENST00000564013 466 ntBASIC20.87■□□□□ 0.93
KCNQ4P56696 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.87■□□□□ 0.93
KCNQ4P56696 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNQ4P56696 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.87■□□□□ 0.93
KCNQ4P56696 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNQ4P56696 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ4P56696 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ4P56696 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNQ4P56696 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ4P56696 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ4P56696 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ4P56696 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
KCNQ4P56696 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNQ4P56696 LINC02012-201ENST00000608206 1725 ntBASIC20.87■□□□□ 0.93
KCNQ4P56696 AL512652.2-201ENST00000625156 1716 ntBASIC20.87■□□□□ 0.93
KCNQ4P56696 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
KCNQ4P56696 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
KCNQ4P56696 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ4P56696 AC135050.7-201ENST00000624508 2218 ntBASIC20.86■□□□□ 0.93
KCNQ4P56696 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ4P56696 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ4P56696 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ4P56696 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ4P56696 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ4P56696 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ4P56696 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
KCNQ4P56696 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.86■□□□□ 0.93
KCNQ4P56696 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
KCNQ4P56696 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ4P56696 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ4P56696 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNQ4P56696 HIST3H2BA-201ENST00000436555 524 ntBASIC20.86■□□□□ 0.93
KCNQ4P56696 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNQ4P56696 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNQ4P56696 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
KCNQ4P56696 AC026979.3-201ENST00000607315 403 ntBASIC20.86■□□□□ 0.93
KCNQ4P56696 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.86■□□□□ 0.93
KCNQ4P56696 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.86■□□□□ 0.93
KCNQ4P56696 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.86■□□□□ 0.93
KCNQ4P56696 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNQ4P56696 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ4P56696 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.86■□□□□ 0.93
KCNQ4P56696 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ4P56696 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.86■□□□□ 0.93
KCNQ4P56696 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ4P56696 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ4P56696 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ4P56696 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNQ4P56696 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.85■□□□□ 0.93
KCNQ4P56696 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ4P56696 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
KCNQ4P56696 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ4P56696 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
KCNQ4P56696 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ4P56696 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ4P56696 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ4P56696 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ4P56696 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ4P56696 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.85■□□□□ 0.93
KCNQ4P56696 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.85■□□□□ 0.93
KCNQ4P56696 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.85■□□□□ 0.93
KCNQ4P56696 BCRP2-202ENST00000447763 634 ntBASIC20.85■□□□□ 0.93
KCNQ4P56696 AL355994.2-201ENST00000447882 704 ntBASIC20.85■□□□□ 0.93
KCNQ4P56696 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.85■□□□□ 0.93
KCNQ4P56696 BCRP6-201ENST00000510112 632 ntBASIC20.85■□□□□ 0.93
KCNQ4P56696 BCRP7-201ENST00000511549 544 ntBASIC20.85■□□□□ 0.93
KCNQ4P56696 RRP7BP-205ENST00000566851 833 ntBASIC20.85■□□□□ 0.93
KCNQ4P56696 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20.85■□□□□ 0.93
KCNQ4P56696 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.85■□□□□ 0.93
KCNQ4P56696 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.85■□□□□ 0.93
KCNQ4P56696 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.85■□□□□ 0.93
KCNQ4P56696 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ4P56696 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.85■□□□□ 0.93
KCNQ4P56696 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ4P56696 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ4P56696 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
KCNQ4P56696 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
KCNQ4P56696 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ4P56696 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNQ4P56696 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNQ4P56696 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms