Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.16■□□□□ 0.18
AP1S2P56377 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
AP1S2P56377 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.16■□□□□ 0.18
AP1S2P56377 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.16■□□□□ 0.18
AP1S2P56377 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.16■□□□□ 0.18
AP1S2P56377 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.16■□□□□ 0.18
AP1S2P56377 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
AP1S2P56377 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
AP1S2P56377 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
AP1S2P56377 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.16■□□□□ 0.18
AP1S2P56377 AL513477.1-201ENST00000602865 2407 ntBASIC16.16■□□□□ 0.18
AP1S2P56377 BCAR1-209ENST00000546196 1340 ntBASIC16.16■□□□□ 0.18
AP1S2P56377 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
AP1S2P56377 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
AP1S2P56377 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP1S2P56377 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.15■□□□□ 0.18
AP1S2P56377 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
AP1S2P56377 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.15■□□□□ 0.18
AP1S2P56377 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
AP1S2P56377 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
AP1S2P56377 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.15■□□□□ 0.18
AP1S2P56377 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.15■□□□□ 0.18
AP1S2P56377 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.15■□□□□ 0.18
AP1S2P56377 AC007967.2-201ENST00000432613 625 ntBASIC16.15■□□□□ 0.18
AP1S2P56377 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.15■□□□□ 0.18
AP1S2P56377 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.15■□□□□ 0.18
AP1S2P56377 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.15■□□□□ 0.18
AP1S2P56377 RNA5SP416-201ENST00000516838 111 ntBASIC16.15■□□□□ 0.18
AP1S2P56377 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.15■□□□□ 0.18
AP1S2P56377 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.15■□□□□ 0.18
AP1S2P56377 AC106730.1-201ENST00000566722 1090 ntBASIC16.15■□□□□ 0.18
AP1S2P56377 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.15■□□□□ 0.18
AP1S2P56377 AL009183.1-201ENST00000603760 355 ntBASIC16.15■□□□□ 0.18
AP1S2P56377 AC027601.4-201ENST00000611259 610 ntBASIC16.15■□□□□ 0.18
AP1S2P56377 AC004877.2-201ENST00000623941 599 ntBASIC16.15■□□□□ 0.18
AP1S2P56377 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.15■□□□□ 0.18
AP1S2P56377 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
AP1S2P56377 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.15■□□□□ 0.18
AP1S2P56377 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
AP1S2P56377 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
AP1S2P56377 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.15■□□□□ 0.18
AP1S2P56377 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP1S2P56377 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
AP1S2P56377 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.14■□□□□ 0.18
AP1S2P56377 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
AP1S2P56377 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.14■□□□□ 0.17
AP1S2P56377 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.14■□□□□ 0.17
AP1S2P56377 AC025580.3-201ENST00000617932 1424 ntBASIC16.14■□□□□ 0.17
AP1S2P56377 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.14■□□□□ 0.17
AP1S2P56377 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
AP1S2P56377 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP1S2P56377 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.14■□□□□ 0.17
AP1S2P56377 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.14■□□□□ 0.17
AP1S2P56377 AC140658.5-201ENST00000438532 169 ntBASIC16.14■□□□□ 0.17
AP1S2P56377 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.14■□□□□ 0.17
AP1S2P56377 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.14■□□□□ 0.17
AP1S2P56377 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
AP1S2P56377 KRT19P2-202ENST00000557173 1012 ntBASIC16.14■□□□□ 0.17
AP1S2P56377 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.14■□□□□ 0.17
AP1S2P56377 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms