Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH12P55289 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH12P55289 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH12P55289 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH12P55289 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CDH12P55289 AC243591.1-201ENST00000452967 1364 ntBASIC15.52■□□□□ 0.08
CDH12P55289 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH12P55289 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH12P55289 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH12P55289 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH12P55289 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CDH12P55289 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH12P55289 MTDHP3-201ENST00000594186 672 ntBASIC15.52■□□□□ 0.08
CDH12P55289 AL139288.1-201ENST00000623748 933 ntBASIC15.52■□□□□ 0.08
CDH12P55289 AL139011.1-202ENST00000642063 584 ntBASIC15.52■□□□□ 0.08
CDH12P55289 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH12P55289 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH12P55289 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH12P55289 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
CDH12P55289 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CDH12P55289 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH12P55289 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CDH12P55289 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CDH12P55289 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.52■□□□□ 0.07
CDH12P55289 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.52■□□□□ 0.07
CDH12P55289 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH12P55289 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CDH12P55289 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CDH12P55289 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH12P55289 KRT18P31-201ENST00000506277 1292 ntBASIC15.51■□□□□ 0.07
CDH12P55289 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH12P55289 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CDH12P55289 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 TERC-201ENST00000602385 541 ntBASIC15.51■□□□□ 0.07
CDH12P55289 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDH12P55289 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH12P55289 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH12P55289 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH12P55289 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CDH12P55289 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CDH12P55289 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH12P55289 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH12P55289 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CDH12P55289 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 GGT3P-204ENST00000453783 1664 ntBASIC15.51■□□□□ 0.07
CDH12P55289 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH12P55289 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDH12P55289 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH12P55289 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH12P55289 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.5■□□□□ 0.07
CDH12P55289 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDH12P55289 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH12P55289 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH12P55289 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDH12P55289 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH12P55289 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH12P55289 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH12P55289 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH12P55289 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH12P55289 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH12P55289 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH12P55289 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH12P55289 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CDH12P55289 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.5■□□□□ 0.07
CDH12P55289 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH12P55289 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.5■□□□□ 0.07
CDH12P55289 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH12P55289 AL121772.3-201ENST00000610840 674 ntBASIC15.5■□□□□ 0.07
CDH12P55289 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDH12P55289 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDH12P55289 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH12P55289 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH12P55289 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH12P55289 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH12P55289 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH12P55289 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH12P55289 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH12P55289 AL671710.1-201ENST00000610245 2349 ntBASIC15.5■□□□□ 0.07
CDH12P55289 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH12P55289 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH12P55289 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH12P55289 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH12P55289 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH12P55289 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH12P55289 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms