Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 AC007950.2-201ENST00000615045 2347 ntBASIC16.75■□□□□ 0.27
LIMK2P53671 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
LIMK2P53671 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.75■□□□□ 0.27
LIMK2P53671 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.75■□□□□ 0.27
LIMK2P53671 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LIMK2P53671 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LIMK2P53671 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LIMK2P53671 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.74■□□□□ 0.27
LIMK2P53671 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.74■□□□□ 0.27
LIMK2P53671 AL512652.2-201ENST00000625156 1716 ntBASIC16.74■□□□□ 0.27
LIMK2P53671 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.74■□□□□ 0.27
LIMK2P53671 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.74■□□□□ 0.27
LIMK2P53671 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.74■□□□□ 0.27
LIMK2P53671 PRSS29P-201ENST00000440800 595 ntBASIC16.74■□□□□ 0.27
LIMK2P53671 VN2R19P-201ENST00000442399 1052 ntBASIC16.74■□□□□ 0.27
LIMK2P53671 MIR4751-201ENST00000578027 74 ntBASIC16.74■□□□□ 0.27
LIMK2P53671 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.74■□□□□ 0.27
LIMK2P53671 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.74■□□□□ 0.27
LIMK2P53671 REXO1L3P-201ENST00000622202 1288 ntBASIC16.74■□□□□ 0.27
LIMK2P53671 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.74■□□□□ 0.27
LIMK2P53671 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.74■□□□□ 0.27
LIMK2P53671 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.74■□□□□ 0.27
LIMK2P53671 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 AC002310.6-201ENST00000624451 1377 ntBASIC16.74■□□□□ 0.27
LIMK2P53671 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LIMK2P53671 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LIMK2P53671 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LIMK2P53671 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.73■□□□□ 0.27
LIMK2P53671 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
LIMK2P53671 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LIMK2P53671 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LIMK2P53671 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LIMK2P53671 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.73■□□□□ 0.27
LIMK2P53671 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.73■□□□□ 0.27
LIMK2P53671 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LIMK2P53671 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LIMK2P53671 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LIMK2P53671 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.73■□□□□ 0.27
LIMK2P53671 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.73■□□□□ 0.27
LIMK2P53671 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LIMK2P53671 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.73■□□□□ 0.27
LIMK2P53671 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.73■□□□□ 0.27
LIMK2P53671 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.73■□□□□ 0.27
LIMK2P53671 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.73■□□□□ 0.27
LIMK2P53671 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.73■□□□□ 0.27
LIMK2P53671 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.73■□□□□ 0.27
LIMK2P53671 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.73■□□□□ 0.27
LIMK2P53671 AL805961.1-202ENST00000641562 540 ntBASIC16.73■□□□□ 0.27
LIMK2P53671 AC079781.4-201ENST00000641908 219 ntBASIC16.73■□□□□ 0.27
LIMK2P53671 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 AL162727.3-201ENST00000635661 2787 ntBASIC16.73■□□□□ 0.27
LIMK2P53671 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 GGT4P-201ENST00000623672 1708 ntBASIC16.73■□□□□ 0.27
LIMK2P53671 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.73■□□□□ 0.27
LIMK2P53671 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LIMK2P53671 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LIMK2P53671 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms