Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.4■□□□□ 0.54
LBX1P52954 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.4■□□□□ 0.54
LBX1P52954 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.4■□□□□ 0.54
LBX1P52954 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.4■□□□□ 0.54
LBX1P52954 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
LBX1P52954 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LBX1P52954 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
LBX1P52954 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LBX1P52954 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.39■□□□□ 0.53
LBX1P52954 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LBX1P52954 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LBX1P52954 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.39■□□□□ 0.53
LBX1P52954 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LBX1P52954 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
LBX1P52954 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.39■□□□□ 0.53
LBX1P52954 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.39■□□□□ 0.53
LBX1P52954 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LBX1P52954 AC125604.1-201ENST00000496255 707 ntBASIC18.39■□□□□ 0.53
LBX1P52954 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.39■□□□□ 0.53
LBX1P52954 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.39■□□□□ 0.53
LBX1P52954 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LBX1P52954 AC135983.4-201ENST00000564116 1262 ntBASIC18.39■□□□□ 0.53
LBX1P52954 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.39■□□□□ 0.53
LBX1P52954 AC025279.2-201ENST00000569730 653 ntBASIC18.39■□□□□ 0.53
LBX1P52954 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
LBX1P52954 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LBX1P52954 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LBX1P52954 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LBX1P52954 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LBX1P52954 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.39■□□□□ 0.53
LBX1P52954 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
LBX1P52954 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.39■□□□□ 0.53
LBX1P52954 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.39■□□□□ 0.53
LBX1P52954 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LBX1P52954 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LBX1P52954 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LBX1P52954 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.38■□□□□ 0.53
LBX1P52954 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LBX1P52954 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LBX1P52954 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LBX1P52954 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LBX1P52954 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LBX1P52954 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LBX1P52954 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.38■□□□□ 0.53
LBX1P52954 POM121L10P-201ENST00000436994 1285 ntBASIC18.38■□□□□ 0.53
LBX1P52954 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC18.38■□□□□ 0.53
LBX1P52954 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.38■□□□□ 0.53
LBX1P52954 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC18.38■□□□□ 0.53
LBX1P52954 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.38■□□□□ 0.53
LBX1P52954 RN7SL574P-201ENST00000581512 297 ntBASIC18.38■□□□□ 0.53
LBX1P52954 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.38■□□□□ 0.53
LBX1P52954 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.38■□□□□ 0.53
LBX1P52954 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LBX1P52954 AC073352.2-201ENST00000609385 439 ntBASIC18.38■□□□□ 0.53
LBX1P52954 AL136301.1-201ENST00000615830 422 ntBASIC18.38■□□□□ 0.53
LBX1P52954 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LBX1P52954 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LBX1P52954 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LBX1P52954 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LBX1P52954 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.38■□□□□ 0.53
LBX1P52954 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
LBX1P52954 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LBX1P52954 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
LBX1P52954 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LBX1P52954 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LBX1P52954 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.38■□□□□ 0.53
LBX1P52954 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LBX1P52954 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LBX1P52954 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LBX1P52954 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.38■□□□□ 0.53
LBX1P52954 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.37■□□□□ 0.53
LBX1P52954 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.37■□□□□ 0.53
LBX1P52954 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LBX1P52954 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LBX1P52954 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.37■□□□□ 0.53
LBX1P52954 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LBX1P52954 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LBX1P52954 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
LBX1P52954 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LBX1P52954 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LBX1P52954 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.37■□□□□ 0.53
LBX1P52954 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LBX1P52954 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.37■□□□□ 0.53
LBX1P52954 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LBX1P52954 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.37■□□□□ 0.53
LBX1P52954 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.37■□□□□ 0.53
LBX1P52954 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.37■□□□□ 0.53
LBX1P52954 AC141586.1-203ENST00000567242 366 ntBASIC18.37■□□□□ 0.53
LBX1P52954 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LBX1P52954 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.37■□□□□ 0.53
LBX1P52954 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LBX1P52954 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LBX1P52954 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LBX1P52954 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.37■□□□□ 0.53
LBX1P52954 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LBX1P52954 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LBX1P52954 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LBX1P52954 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LBX1P52954 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.37■□□□□ 0.53
LBX1P52954 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms