Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RNF144AP50876 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.49■□□□□ 0.07
RNF144AP50876 RNA5SP415-201ENST00000517246 115 ntBASIC15.49■□□□□ 0.07
RNF144AP50876 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF144AP50876 UNC93B6-202ENST00000528242 690 ntBASIC15.49■□□□□ 0.07
RNF144AP50876 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF144AP50876 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.49■□□□□ 0.07
RNF144AP50876 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF144AP50876 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.49■□□□□ 0.07
RNF144AP50876 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.49■□□□□ 0.07
RNF144AP50876 NFIC-211ENST00000641145 8399 ntBASIC15.49■□□□□ 0.07
RNF144AP50876 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 AC006277.1-201ENST00000624348 1610 ntBASIC15.49■□□□□ 0.07
RNF144AP50876 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RNF144AP50876 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF144AP50876 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF144AP50876 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF144AP50876 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.49■□□□□ 0.07
RNF144AP50876 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF144AP50876 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RNF144AP50876 AC006449.5-201ENST00000610658 2098 ntBASIC15.48■□□□□ 0.07
RNF144AP50876 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF144AP50876 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF144AP50876 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF144AP50876 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF144AP50876 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RNF144AP50876 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RNF144AP50876 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF144AP50876 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF144AP50876 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF144AP50876 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF144AP50876 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF144AP50876 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF144AP50876 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RNF144AP50876 MPDU1-223ENST00000582151 728 ntBASIC15.48■□□□□ 0.07
RNF144AP50876 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF144AP50876 AF228730.7-201ENST00000641842 219 ntBASIC15.48■□□□□ 0.07
RNF144AP50876 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF144AP50876 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF144AP50876 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF144AP50876 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF144AP50876 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF144AP50876 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF144AP50876 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
RNF144AP50876 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF144AP50876 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF144AP50876 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
RNF144AP50876 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF144AP50876 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF144AP50876 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RNF144AP50876 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF144AP50876 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF144AP50876 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
RNF144AP50876 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RNF144AP50876 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF144AP50876 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF144AP50876 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF144AP50876 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
RNF144AP50876 MRPL20P1-201ENST00000400819 433 ntBASIC15.47■□□□□ 0.07
RNF144AP50876 AC009947.1-201ENST00000444350 727 ntBASIC15.47■□□□□ 0.07
RNF144AP50876 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 AC093909.1-201ENST00000504731 1122 ntBASIC15.47■□□□□ 0.07
RNF144AP50876 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.47■□□□□ 0.07
RNF144AP50876 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.47■□□□□ 0.07
RNF144AP50876 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF144AP50876 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF144AP50876 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
RNF144AP50876 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF144AP50876 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF144AP50876 SNX33P1-201ENST00000592116 1762 ntBASIC15.47■□□□□ 0.07
RNF144AP50876 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF144AP50876 LINC00895-201ENST00000629028 1637 ntBASIC15.46■□□□□ 0.07
RNF144AP50876 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
RNF144AP50876 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms