Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.8□□□□□ -0.04
SRP9P49458 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SRP9P49458 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.8□□□□□ -0.04
SRP9P49458 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
SRP9P49458 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.8□□□□□ -0.04
SRP9P49458 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.8□□□□□ -0.04
SRP9P49458 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SRP9P49458 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
SRP9P49458 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRP9P49458 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.79□□□□□ -0.04
SRP9P49458 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.79□□□□□ -0.04
SRP9P49458 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.79□□□□□ -0.04
SRP9P49458 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SRP9P49458 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SRP9P49458 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SRP9P49458 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.79□□□□□ -0.04
SRP9P49458 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.79□□□□□ -0.04
SRP9P49458 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.79□□□□□ -0.04
SRP9P49458 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.79□□□□□ -0.04
SRP9P49458 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SRP9P49458 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.79□□□□□ -0.04
SRP9P49458 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.79□□□□□ -0.04
SRP9P49458 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 FGFR3P6-201ENST00000457012 610 ntBASIC14.79□□□□□ -0.04
SRP9P49458 AF238378.1-201ENST00000526806 358 ntBASIC14.79□□□□□ -0.04
SRP9P49458 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.79□□□□□ -0.04
SRP9P49458 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.79□□□□□ -0.04
SRP9P49458 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.79□□□□□ -0.04
SRP9P49458 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.79□□□□□ -0.04
SRP9P49458 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.79□□□□□ -0.04
SRP9P49458 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRP9P49458 AL121912.1-201ENST00000603683 238 ntBASIC14.79□□□□□ -0.04
SRP9P49458 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.79□□□□□ -0.04
SRP9P49458 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SRP9P49458 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SRP9P49458 AL022326.1-202ENST00000641533 845 ntBASIC14.79□□□□□ -0.04
SRP9P49458 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.79□□□□□ -0.04
SRP9P49458 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.79□□□□□ -0.04
SRP9P49458 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.79□□□□□ -0.04
SRP9P49458 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.79□□□□□ -0.04
SRP9P49458 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.78□□□□□ -0.04
SRP9P49458 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.78□□□□□ -0.04
SRP9P49458 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SRP9P49458 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SRP9P49458 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.78□□□□□ -0.04
SRP9P49458 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.78□□□□□ -0.04
SRP9P49458 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
SRP9P49458 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.78□□□□□ -0.04
SRP9P49458 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SRP9P49458 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.78□□□□□ -0.04
SRP9P49458 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.78□□□□□ -0.04
SRP9P49458 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.78□□□□□ -0.04
SRP9P49458 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.78□□□□□ -0.04
SRP9P49458 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.78□□□□□ -0.04
SRP9P49458 AC073648.2-201ENST00000510116 352 ntBASIC14.78□□□□□ -0.04
SRP9P49458 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.78□□□□□ -0.04
SRP9P49458 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.78□□□□□ -0.04
SRP9P49458 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms