Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.53■□□□□ 0.4
PCK1P35558 AC108073.2-201ENST00000464002 357 ntBASIC17.53■□□□□ 0.4
PCK1P35558 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCK1P35558 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.53■□□□□ 0.4
PCK1P35558 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.53■□□□□ 0.4
PCK1P35558 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCK1P35558 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCK1P35558 OR7E47P-204ENST00000575924 449 ntBASIC17.53■□□□□ 0.4
PCK1P35558 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.53■□□□□ 0.4
PCK1P35558 MIR7706-201ENST00000613747 67 ntBASIC17.53■□□□□ 0.4
PCK1P35558 AC117500.6-201ENST00000624871 588 ntBASIC17.53■□□□□ 0.4
PCK1P35558 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.53■□□□□ 0.4
PCK1P35558 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCK1P35558 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PCK1P35558 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCK1P35558 KRT8P39-201ENST00000396270 1433 ntBASIC17.53■□□□□ 0.4
PCK1P35558 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCK1P35558 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCK1P35558 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCK1P35558 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCK1P35558 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCK1P35558 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PCK1P35558 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.52■□□□□ 0.4
PCK1P35558 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.52■□□□□ 0.4
PCK1P35558 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.52■□□□□ 0.4
PCK1P35558 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.52■□□□□ 0.4
PCK1P35558 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.52■□□□□ 0.4
PCK1P35558 HCG4-201ENST00000418983 998 ntBASIC17.52■□□□□ 0.4
PCK1P35558 RNA5SP419-201ENST00000515908 135 ntBASIC17.52■□□□□ 0.4
PCK1P35558 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCK1P35558 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.52■□□□□ 0.4
PCK1P35558 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCK1P35558 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCK1P35558 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.52■□□□□ 0.39
PCK1P35558 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.52■□□□□ 0.39
PCK1P35558 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCK1P35558 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCK1P35558 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCK1P35558 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCK1P35558 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCK1P35558 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.52■□□□□ 0.39
PCK1P35558 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCK1P35558 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCK1P35558 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.51■□□□□ 0.39
PCK1P35558 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.51■□□□□ 0.39
PCK1P35558 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCK1P35558 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.51■□□□□ 0.39
PCK1P35558 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCK1P35558 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.51■□□□□ 0.39
PCK1P35558 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 MRPL3P1-201ENST00000400109 1033 ntBASIC17.51■□□□□ 0.39
PCK1P35558 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCK1P35558 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.51■□□□□ 0.39
PCK1P35558 PRSS29P-201ENST00000440800 595 ntBASIC17.51■□□□□ 0.39
PCK1P35558 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCK1P35558 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.51■□□□□ 0.39
PCK1P35558 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
PCK1P35558 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.51■□□□□ 0.39
PCK1P35558 AC087641.1-201ENST00000557561 1021 ntBASIC17.51■□□□□ 0.39
PCK1P35558 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.51■□□□□ 0.39
PCK1P35558 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.51■□□□□ 0.39
PCK1P35558 CYP2A7P1-201ENST00000595391 815 ntBASIC17.51■□□□□ 0.39
PCK1P35558 AL049840.3-201ENST00000602669 611 ntBASIC17.51■□□□□ 0.39
PCK1P35558 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.51■□□□□ 0.39
PCK1P35558 AC010654.1-201ENST00000615722 808 ntBASIC17.51■□□□□ 0.39
PCK1P35558 AC004790.2-201ENST00000623588 572 ntBASIC17.51■□□□□ 0.39
PCK1P35558 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms