Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.63■□□□□ 0.89
RFC4P35249 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.63■□□□□ 0.89
RFC4P35249 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC4P35249 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.63■□□□□ 0.89
RFC4P35249 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC4P35249 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.63■□□□□ 0.89
RFC4P35249 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFC4P35249 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
RFC4P35249 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RFC4P35249 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC4P35249 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFC4P35249 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RFC4P35249 AC104989.1-201ENST00000519711 778 ntBASIC20.63■□□□□ 0.89
RFC4P35249 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.63■□□□□ 0.89
RFC4P35249 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFC4P35249 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC4P35249 TIMM17BP1-201ENST00000545713 516 ntBASIC20.63■□□□□ 0.89
RFC4P35249 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
RFC4P35249 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC4P35249 AC020765.3-201ENST00000613051 740 ntBASIC20.63■□□□□ 0.89
RFC4P35249 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC4P35249 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.63■□□□□ 0.89
RFC4P35249 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RFC4P35249 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.63■□□□□ 0.89
RFC4P35249 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.63■□□□□ 0.89
RFC4P35249 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFC4P35249 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFC4P35249 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC4P35249 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC4P35249 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RFC4P35249 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC4P35249 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.63■□□□□ 0.89
RFC4P35249 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
RFC4P35249 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFC4P35249 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20.62■□□□□ 0.89
RFC4P35249 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC4P35249 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC4P35249 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.62■□□□□ 0.89
RFC4P35249 CDC14C-201ENST00000428251 1719 ntBASIC20.62■□□□□ 0.89
RFC4P35249 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.62■□□□□ 0.89
RFC4P35249 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RFC4P35249 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFC4P35249 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC4P35249 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.62■□□□□ 0.89
RFC4P35249 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RFC4P35249 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.62■□□□□ 0.89
RFC4P35249 BNIP3P42-201ENST00000454982 569 ntBASIC20.62■□□□□ 0.89
RFC4P35249 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFC4P35249 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RFC4P35249 BNIP3P29-201ENST00000598302 571 ntBASIC20.62■□□□□ 0.89
RFC4P35249 AC011447.5-201ENST00000616168 564 ntBASIC20.62■□□□□ 0.89
RFC4P35249 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.62■□□□□ 0.89
RFC4P35249 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.62■□□□□ 0.89
RFC4P35249 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.62■□□□□ 0.89
RFC4P35249 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.62■□□□□ 0.89
RFC4P35249 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFC4P35249 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC4P35249 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
RFC4P35249 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC4P35249 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
RFC4P35249 CLK3P2-201ENST00000427566 1453 ntBASIC20.62■□□□□ 0.89
RFC4P35249 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RFC4P35249 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.62■□□□□ 0.89
RFC4P35249 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
RFC4P35249 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RFC4P35249 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC4P35249 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFC4P35249 AC092068.3-201ENST00000587894 2016 ntBASIC20.61■□□□□ 0.89
RFC4P35249 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFC4P35249 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFC4P35249 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC4P35249 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC4P35249 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RFC4P35249 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC4P35249 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC4P35249 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.61■□□□□ 0.89
RFC4P35249 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFC4P35249 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.61■□□□□ 0.89
RFC4P35249 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.61■□□□□ 0.89
RFC4P35249 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC20.61■□□□□ 0.89
RFC4P35249 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RFC4P35249 AC104596.2-201ENST00000512793 793 ntBASIC20.61■□□□□ 0.89
RFC4P35249 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.61■□□□□ 0.89
RFC4P35249 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.61■□□□□ 0.89
RFC4P35249 MIR4538-201ENST00000581377 78 ntBASIC20.61■□□□□ 0.89
RFC4P35249 AC084346.2-201ENST00000607097 949 ntBASIC20.61■□□□□ 0.89
RFC4P35249 AC074044.1-201ENST00000609673 707 ntBASIC20.61■□□□□ 0.89
RFC4P35249 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RFC4P35249 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
RFC4P35249 PCDHB17P-201ENST00000539533 2393 ntBASIC20.61■□□□□ 0.89
RFC4P35249 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC4P35249 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC4P35249 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.61■□□□□ 0.89
RFC4P35249 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
RFC4P35249 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RFC4P35249 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC4P35249 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC4P35249 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.61■□□□□ 0.89
RFC4P35249 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC4P35249 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms