Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC068880.1-201ENST00000507289 2297 ntBASIC20.34■□□□□ 0.85
TM4SF1P30408 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF1P30408 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF1P30408 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TM4SF1P30408 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.34■□□□□ 0.85
TM4SF1P30408 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF1P30408 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF1P30408 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF1P30408 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF1P30408 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.33■□□□□ 0.85
TM4SF1P30408 PDIA3P1-201ENST00000471856 1510 ntBASIC20.33■□□□□ 0.85
TM4SF1P30408 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF1P30408 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF1P30408 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF1P30408 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF1P30408 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF1P30408 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF1P30408 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.33■□□□□ 0.85
TM4SF1P30408 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TM4SF1P30408 KRT43P-201ENST00000434019 910 ntBASIC20.33■□□□□ 0.85
TM4SF1P30408 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.33■□□□□ 0.85
TM4SF1P30408 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
TM4SF1P30408 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.33■□□□□ 0.85
TM4SF1P30408 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.33■□□□□ 0.85
TM4SF1P30408 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TM4SF1P30408 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TM4SF1P30408 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.33■□□□□ 0.84
TM4SF1P30408 AL136982.4-201ENST00000437689 1740 ntBASIC20.33■□□□□ 0.84
TM4SF1P30408 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TM4SF1P30408 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
TM4SF1P30408 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC20.33■□□□□ 0.84
TM4SF1P30408 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF1P30408 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF1P30408 AL031731.1-201ENST00000642131 2094 ntBASIC20.32■□□□□ 0.84
TM4SF1P30408 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF1P30408 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.32■□□□□ 0.84
TM4SF1P30408 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.32■□□□□ 0.84
TM4SF1P30408 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF1P30408 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF1P30408 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.32■□□□□ 0.84
TM4SF1P30408 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.32■□□□□ 0.84
TM4SF1P30408 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TM4SF1P30408 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.32■□□□□ 0.84
TM4SF1P30408 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TM4SF1P30408 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20.32■□□□□ 0.84
TM4SF1P30408 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.32■□□□□ 0.84
TM4SF1P30408 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF1P30408 TECR-220ENST00000600083 1204 ntTSL 2 BASIC20.32■□□□□ 0.84
TM4SF1P30408 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF1P30408 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.32■□□□□ 0.84
TM4SF1P30408 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.32■□□□□ 0.84
TM4SF1P30408 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.32■□□□□ 0.84
TM4SF1P30408 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF1P30408 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF1P30408 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF1P30408 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF1P30408 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF1P30408 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TM4SF1P30408 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.32■□□□□ 0.84
TM4SF1P30408 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM4SF1P30408 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TM4SF1P30408 Z97205.2-201ENST00000564697 1639 ntBASIC20.31■□□□□ 0.84
TM4SF1P30408 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM4SF1P30408 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM4SF1P30408 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM4SF1P30408 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM4SF1P30408 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM4SF1P30408 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM4SF1P30408 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TM4SF1P30408 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.31■□□□□ 0.84
TM4SF1P30408 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TM4SF1P30408 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM4SF1P30408 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM4SF1P30408 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM4SF1P30408 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TM4SF1P30408 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TM4SF1P30408 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.31■□□□□ 0.84
TM4SF1P30408 CTBP2P5-201ENST00000454986 1264 ntBASIC20.31■□□□□ 0.84
TM4SF1P30408 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC20.31■□□□□ 0.84
TM4SF1P30408 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.31■□□□□ 0.84
TM4SF1P30408 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.31■□□□□ 0.84
TM4SF1P30408 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TM4SF1P30408 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TM4SF1P30408 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.3■□□□□ 0.84
TM4SF1P30408 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM4SF1P30408 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.3■□□□□ 0.84
TM4SF1P30408 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.3■□□□□ 0.84
TM4SF1P30408 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TM4SF1P30408 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM4SF1P30408 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.3■□□□□ 0.84
TM4SF1P30408 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TM4SF1P30408 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.3■□□□□ 0.84
TM4SF1P30408 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
TM4SF1P30408 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TM4SF1P30408 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TM4SF1P30408 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.3■□□□□ 0.84
TM4SF1P30408 AC099336.1-201ENST00000417053 1171 ntBASIC20.3■□□□□ 0.84
TM4SF1P30408 ACTG1P3-201ENST00000431775 1114 ntBASIC20.3■□□□□ 0.84
TM4SF1P30408 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.3■□□□□ 0.84
TM4SF1P30408 HNRNPA1P13-201ENST00000510646 963 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms