Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.38■□□□□ 0.21
VARSP26640 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.38■□□□□ 0.21
VARSP26640 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.38■□□□□ 0.21
VARSP26640 AC104109.2-201ENST00000602919 1418 ntBASIC16.38■□□□□ 0.21
VARSP26640 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VARSP26640 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.38■□□□□ 0.21
VARSP26640 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.38■□□□□ 0.21
VARSP26640 AL645728.1-201ENST00000366221 2101 ntBASIC16.38■□□□□ 0.21
VARSP26640 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.38■□□□□ 0.21
VARSP26640 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.38■□□□□ 0.21
VARSP26640 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.38■□□□□ 0.21
VARSP26640 RPS15P9-201ENST00000494093 319 ntBASIC16.38■□□□□ 0.21
VARSP26640 AC136632.2-201ENST00000512891 861 ntBASIC16.38■□□□□ 0.21
VARSP26640 PGAM5P1-201ENST00000518923 814 ntBASIC16.38■□□□□ 0.21
VARSP26640 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.38■□□□□ 0.21
VARSP26640 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.38■□□□□ 0.21
VARSP26640 AC140113.2-201ENST00000604370 208 ntBASIC16.38■□□□□ 0.21
VARSP26640 AL805961.1-202ENST00000641562 540 ntBASIC16.38■□□□□ 0.21
VARSP26640 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 TUBB8P12-201ENST00000308911 1335 ntBASIC16.38■□□□□ 0.21
VARSP26640 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.38■□□□□ 0.21
VARSP26640 TUBB7P-202ENST00000428444 1305 ntBASIC16.38■□□□□ 0.21
VARSP26640 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.38■□□□□ 0.21
VARSP26640 TUBB8P7-204ENST00000567960 1332 ntBASIC16.38■□□□□ 0.21
VARSP26640 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.38■□□□□ 0.21
VARSP26640 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
VARSP26640 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.38■□□□□ 0.21
VARSP26640 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.37■□□□□ 0.21
VARSP26640 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VARSP26640 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.37■□□□□ 0.21
VARSP26640 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.37■□□□□ 0.21
VARSP26640 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.37■□□□□ 0.21
VARSP26640 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.37■□□□□ 0.21
VARSP26640 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.37■□□□□ 0.21
VARSP26640 AC105339.3-201ENST00000560043 636 ntBASIC16.37■□□□□ 0.21
VARSP26640 AL356488.2-201ENST00000602755 427 ntBASIC16.37■□□□□ 0.21
VARSP26640 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.37■□□□□ 0.21
VARSP26640 Z83851.2-201ENST00000609564 659 ntBASIC16.37■□□□□ 0.21
VARSP26640 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.37■□□□□ 0.21
VARSP26640 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VARSP26640 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.37■□□□□ 0.21
VARSP26640 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VARSP26640 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VARSP26640 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
VARSP26640 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VARSP26640 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VARSP26640 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.36■□□□□ 0.21
VARSP26640 AC007950.2-201ENST00000615045 2347 ntBASIC16.36■□□□□ 0.21
VARSP26640 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VARSP26640 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
VARSP26640 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.36■□□□□ 0.21
VARSP26640 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.36■□□□□ 0.21
VARSP26640 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.36■□□□□ 0.21
VARSP26640 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
VARSP26640 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.36■□□□□ 0.21
VARSP26640 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.36■□□□□ 0.21
VARSP26640 KRT18P3-201ENST00000451602 1288 ntBASIC16.36■□□□□ 0.21
VARSP26640 AC087163.2-201ENST00000457299 853 ntBASIC16.36■□□□□ 0.21
VARSP26640 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.36■□□□□ 0.21
VARSP26640 RNA5SP416-201ENST00000516838 111 ntBASIC16.36■□□□□ 0.21
VARSP26640 AP002490.2-201ENST00000524791 560 ntBASIC16.36■□□□□ 0.21
VARSP26640 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.36■□□□□ 0.21
VARSP26640 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
VARSP26640 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms