Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
MMP8P22894 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MMP8P22894 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MMP8P22894 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MMP8P22894 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP8P22894 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
MMP8P22894 AC005622.1-201ENST00000636801 1703 ntBASIC17.42■□□□□ 0.38
MMP8P22894 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP8P22894 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
MMP8P22894 AC074386.1-202ENST00000463561 864 ntBASIC17.42■□□□□ 0.38
MMP8P22894 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.42■□□□□ 0.38
MMP8P22894 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.42■□□□□ 0.38
MMP8P22894 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.42■□□□□ 0.38
MMP8P22894 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
MMP8P22894 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
MMP8P22894 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.42■□□□□ 0.38
MMP8P22894 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP8P22894 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
MMP8P22894 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP8P22894 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MMP8P22894 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.42■□□□□ 0.38
MMP8P22894 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP8P22894 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP8P22894 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP8P22894 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MMP8P22894 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MMP8P22894 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.41■□□□□ 0.38
MMP8P22894 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
MMP8P22894 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
MMP8P22894 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP8P22894 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
MMP8P22894 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP8P22894 PCDHA1-201ENST00000378133 2726 ntBASIC17.41■□□□□ 0.38
MMP8P22894 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.41■□□□□ 0.38
MMP8P22894 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MMP8P22894 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP8P22894 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP8P22894 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP8P22894 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP8P22894 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP8P22894 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP8P22894 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.41■□□□□ 0.38
MMP8P22894 AP002472.1-201ENST00000577490 586 ntBASIC17.41■□□□□ 0.38
MMP8P22894 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.41■□□□□ 0.38
MMP8P22894 AC068137.2-201ENST00000605408 478 ntBASIC17.41■□□□□ 0.38
MMP8P22894 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP8P22894 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP8P22894 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP8P22894 OR6D1P-203ENST00000641209 4860 ntBASIC17.41■□□□□ 0.38
MMP8P22894 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP8P22894 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP8P22894 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MMP8P22894 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP8P22894 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MMP8P22894 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP8P22894 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP8P22894 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
MMP8P22894 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MMP8P22894 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP8P22894 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
MMP8P22894 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP8P22894 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MMP8P22894 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MMP8P22894 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP8P22894 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms