Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3BP20337 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3BP20337 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3BP20337 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3BP20337 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3BP20337 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.61□□□□□ -0.07
RAB3BP20337 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3BP20337 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3BP20337 AC013268.4-201ENST00000637413 2228 ntBASIC14.61□□□□□ -0.07
RAB3BP20337 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3BP20337 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3BP20337 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RAB3BP20337 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3BP20337 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RAB3BP20337 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RAB3BP20337 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB3BP20337 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 AP002414.2-201ENST00000591780 3365 ntBASIC14.6□□□□□ -0.07
RAB3BP20337 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RAB3BP20337 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB3BP20337 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.6□□□□□ -0.07
RAB3BP20337 AC112907.2-201ENST00000448639 330 ntBASIC14.6□□□□□ -0.07
RAB3BP20337 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.6□□□□□ -0.07
RAB3BP20337 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 AC010203.1-204ENST00000548782 407 ntBASIC14.6□□□□□ -0.07
RAB3BP20337 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.6□□□□□ -0.07
RAB3BP20337 AC145285.6-201ENST00000604632 637 ntBASIC14.6□□□□□ -0.07
RAB3BP20337 AC139887.4-201ENST00000607877 719 ntBASIC14.6□□□□□ -0.07
RAB3BP20337 AP006294.2-201ENST00000641667 209 ntBASIC14.6□□□□□ -0.07
RAB3BP20337 AC006058.4-201ENST00000624016 1670 ntBASIC14.6□□□□□ -0.07
RAB3BP20337 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RAB3BP20337 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB3BP20337 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RAB3BP20337 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
RAB3BP20337 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB3BP20337 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB3BP20337 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 PRAL-201ENST00000624952 3286 ntBASIC14.59□□□□□ -0.07
RAB3BP20337 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAB3BP20337 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
RAB3BP20337 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB3BP20337 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
RAB3BP20337 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB3BP20337 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 AL845331.1-201ENST00000424978 1190 ntBASIC14.59□□□□□ -0.07
RAB3BP20337 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
RAB3BP20337 SIGLEC30P-201ENST00000455569 941 ntBASIC14.59□□□□□ -0.07
RAB3BP20337 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB3BP20337 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB3BP20337 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RAB3BP20337 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB3BP20337 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB3BP20337 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RAB3BP20337 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
RAB3BP20337 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB3BP20337 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
RAB3BP20337 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB3BP20337 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.58□□□□□ -0.07
RAB3BP20337 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB3BP20337 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
RAB3BP20337 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAB3BP20337 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAB3BP20337 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB3BP20337 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.58□□□□□ -0.07
RAB3BP20337 CDC14C-201ENST00000428251 1719 ntBASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms