Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CCL4P13236 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.56■□□□□ 0.08
CCL4P13236 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.56■□□□□ 0.08
CCL4P13236 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.56■□□□□ 0.08
CCL4P13236 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCL4P13236 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL4P13236 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.55■□□□□ 0.08
CCL4P13236 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCL4P13236 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL4P13236 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL4P13236 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.55■□□□□ 0.08
CCL4P13236 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.55■□□□□ 0.08
CCL4P13236 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL4P13236 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL4P13236 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.55■□□□□ 0.08
CCL4P13236 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCL4P13236 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCL4P13236 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL4P13236 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL4P13236 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.55■□□□□ 0.08
CCL4P13236 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.55■□□□□ 0.08
CCL4P13236 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.55■□□□□ 0.08
CCL4P13236 AC044860.1-202ENST00000559481 777 ntBASIC15.55■□□□□ 0.08
CCL4P13236 AC010336.2-201ENST00000564226 506 ntBASIC15.55■□□□□ 0.08
CCL4P13236 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.55■□□□□ 0.08
CCL4P13236 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.55■□□□□ 0.08
CCL4P13236 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.55■□□□□ 0.08
CCL4P13236 AL139011.1-202ENST00000642063 584 ntBASIC15.55■□□□□ 0.08
CCL4P13236 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL4P13236 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL4P13236 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL4P13236 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCL4P13236 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL4P13236 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCL4P13236 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 AL023806.1-201ENST00000603994 1649 ntBASIC15.54■□□□□ 0.08
CCL4P13236 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL4P13236 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL4P13236 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CCL4P13236 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL4P13236 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CCL4P13236 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CCL4P13236 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CCL4P13236 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CCL4P13236 AC140912.1-201ENST00000577171 1054 ntBASIC15.54■□□□□ 0.08
CCL4P13236 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.54■□□□□ 0.08
CCL4P13236 AC004790.1-201ENST00000612686 536 ntBASIC15.54■□□□□ 0.08
CCL4P13236 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.54■□□□□ 0.08
CCL4P13236 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL4P13236 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 AC060834.1-201ENST00000443027 2032 ntBASIC15.54■□□□□ 0.08
CCL4P13236 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CCL4P13236 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.54■□□□□ 0.08
CCL4P13236 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCL4P13236 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.54■□□□□ 0.08
CCL4P13236 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCL4P13236 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CCL4P13236 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 AC139713.2-201ENST00000641328 2723 ntBASIC15.53■□□□□ 0.08
CCL4P13236 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CCL4P13236 AL031731.1-201ENST00000642131 2094 ntBASIC15.53■□□□□ 0.08
CCL4P13236 BTBD7P1-201ENST00000447253 1453 ntBASIC15.53■□□□□ 0.08
CCL4P13236 AC138969.3-201ENST00000546612 1459 ntBASIC15.53■□□□□ 0.08
CCL4P13236 AC138932.2-201ENST00000548268 1459 ntBASIC15.53■□□□□ 0.08
CCL4P13236 AC126755.4-201ENST00000549796 1459 ntBASIC15.53■□□□□ 0.08
CCL4P13236 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.53■□□□□ 0.08
CCL4P13236 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CCL4P13236 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL4P13236 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CCL4P13236 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms