Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.5■□□□□ 0.39
KRT3P12035 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT3P12035 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
KRT3P12035 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.49■□□□□ 0.39
KRT3P12035 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT3P12035 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT3P12035 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.49■□□□□ 0.39
KRT3P12035 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
KRT3P12035 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT3P12035 AC023141.13-201ENST00000604991 943 ntBASIC17.49■□□□□ 0.39
KRT3P12035 AC064836.3-201ENST00000607928 673 ntBASIC17.49■□□□□ 0.39
KRT3P12035 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT3P12035 AC007064.4-201ENST00000637740 555 ntBASIC17.49■□□□□ 0.39
KRT3P12035 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT3P12035 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT3P12035 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 ZNF259P1-201ENST00000407656 1365 ntBASIC17.49■□□□□ 0.39
KRT3P12035 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
KRT3P12035 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
KRT3P12035 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
KRT3P12035 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT3P12035 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT3P12035 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT3P12035 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.48■□□□□ 0.39
KRT3P12035 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
KRT3P12035 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
KRT3P12035 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT3P12035 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 RNU1-129P-201ENST00000384064 167 ntBASIC17.48■□□□□ 0.39
KRT3P12035 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.48■□□□□ 0.39
KRT3P12035 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.48■□□□□ 0.39
KRT3P12035 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
KRT3P12035 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.48■□□□□ 0.39
KRT3P12035 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.48■□□□□ 0.39
KRT3P12035 U1.21-201ENST00000580816 167 ntBASIC17.48■□□□□ 0.39
KRT3P12035 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT3P12035 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.48■□□□□ 0.39
KRT3P12035 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
KRT3P12035 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
KRT3P12035 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
KRT3P12035 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
KRT3P12035 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 PCGF3-213ENST00000620529 1899 ntBASIC17.48■□□□□ 0.39
KRT3P12035 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT3P12035 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT3P12035 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT3P12035 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
KRT3P12035 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT3P12035 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT3P12035 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT3P12035 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT3P12035 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT3P12035 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT3P12035 AC007967.2-201ENST00000432613 625 ntBASIC17.47■□□□□ 0.39
KRT3P12035 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.47■□□□□ 0.39
KRT3P12035 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.47■□□□□ 0.39
KRT3P12035 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
KRT3P12035 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.47■□□□□ 0.39
KRT3P12035 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT3P12035 AL031055.1-201ENST00000606362 631 ntBASIC17.47■□□□□ 0.39
KRT3P12035 AC120114.3-201ENST00000611923 658 ntBASIC17.47■□□□□ 0.39
KRT3P12035 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT3P12035 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT3P12035 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
KRT3P12035 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT3P12035 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms