Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TOP1P11387 KRT18P28-201ENST00000453838 1332 ntBASIC19.48■□□□□ 0.71
TOP1P11387 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
TOP1P11387 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.47■□□□□ 0.71
TOP1P11387 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TOP1P11387 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.47■□□□□ 0.71
TOP1P11387 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TOP1P11387 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.47■□□□□ 0.71
TOP1P11387 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.47■□□□□ 0.71
TOP1P11387 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.47■□□□□ 0.71
TOP1P11387 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.47■□□□□ 0.71
TOP1P11387 AL627223.1-201ENST00000416693 442 ntBASIC19.47■□□□□ 0.71
TOP1P11387 SPCS2P4-201ENST00000436160 681 ntBASIC19.47■□□□□ 0.71
TOP1P11387 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.47■□□□□ 0.71
TOP1P11387 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.47■□□□□ 0.71
TOP1P11387 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.47■□□□□ 0.71
TOP1P11387 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.47■□□□□ 0.71
TOP1P11387 AC093520.2-201ENST00000561830 333 ntBASIC19.47■□□□□ 0.71
TOP1P11387 LINC01225-203ENST00000563550 1244 ntBASIC19.47■□□□□ 0.71
TOP1P11387 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.47■□□□□ 0.71
TOP1P11387 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.47■□□□□ 0.71
TOP1P11387 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.47■□□□□ 0.71
TOP1P11387 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.47■□□□□ 0.71
TOP1P11387 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TOP1P11387 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.47■□□□□ 0.71
TOP1P11387 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TOP1P11387 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TOP1P11387 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.47■□□□□ 0.71
TOP1P11387 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.47■□□□□ 0.71
TOP1P11387 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.47■□□□□ 0.71
TOP1P11387 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TOP1P11387 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TOP1P11387 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TOP1P11387 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.46■□□□□ 0.71
TOP1P11387 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TOP1P11387 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TOP1P11387 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TOP1P11387 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.46■□□□□ 0.71
TOP1P11387 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.46■□□□□ 0.71
TOP1P11387 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TOP1P11387 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
TOP1P11387 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
TOP1P11387 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.46■□□□□ 0.71
TOP1P11387 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TOP1P11387 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.46■□□□□ 0.71
TOP1P11387 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.46■□□□□ 0.71
TOP1P11387 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TOP1P11387 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.46■□□□□ 0.71
TOP1P11387 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.46■□□□□ 0.71
TOP1P11387 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TOP1P11387 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.46■□□□□ 0.71
TOP1P11387 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
TOP1P11387 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.46■□□□□ 0.71
TOP1P11387 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TOP1P11387 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.46■□□□□ 0.71
TOP1P11387 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TOP1P11387 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TOP1P11387 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.46■□□□□ 0.71
TOP1P11387 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.46■□□□□ 0.71
TOP1P11387 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.45■□□□□ 0.7
TOP1P11387 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TOP1P11387 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TOP1P11387 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.45■□□□□ 0.7
TOP1P11387 AC005237.2-201ENST00000434368 219 ntBASIC19.45■□□□□ 0.7
TOP1P11387 METTL21AP1-201ENST00000438852 635 ntBASIC19.45■□□□□ 0.7
TOP1P11387 AC023141.5-201ENST00000458585 616 ntBASIC19.45■□□□□ 0.7
TOP1P11387 AC069335.1-201ENST00000489972 472 ntBASIC19.45■□□□□ 0.7
TOP1P11387 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.45■□□□□ 0.7
TOP1P11387 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.45■□□□□ 0.7
TOP1P11387 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TOP1P11387 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms