Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSF1RP07333 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.21■□□□□ 0.83
CSF1RP07333 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.21■□□□□ 0.83
CSF1RP07333 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSF1RP07333 AC010336.2-201ENST00000564226 506 ntBASIC20.21■□□□□ 0.83
CSF1RP07333 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.21■□□□□ 0.83
CSF1RP07333 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
CSF1RP07333 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.21■□□□□ 0.83
CSF1RP07333 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSF1RP07333 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.21■□□□□ 0.83
CSF1RP07333 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CSF1RP07333 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CSF1RP07333 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.21■□□□□ 0.83
CSF1RP07333 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSF1RP07333 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSF1RP07333 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.21■□□□□ 0.83
CSF1RP07333 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSF1RP07333 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSF1RP07333 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.21■□□□□ 0.83
CSF1RP07333 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.21■□□□□ 0.83
CSF1RP07333 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSF1RP07333 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.2■□□□□ 0.82
CSF1RP07333 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSF1RP07333 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSF1RP07333 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.2■□□□□ 0.82
CSF1RP07333 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSF1RP07333 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.2■□□□□ 0.82
CSF1RP07333 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSF1RP07333 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSF1RP07333 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.2■□□□□ 0.82
CSF1RP07333 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.2■□□□□ 0.82
CSF1RP07333 AC026979.3-201ENST00000607315 403 ntBASIC20.2■□□□□ 0.82
CSF1RP07333 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSF1RP07333 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.2■□□□□ 0.82
CSF1RP07333 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.2■□□□□ 0.82
CSF1RP07333 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.2■□□□□ 0.82
CSF1RP07333 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSF1RP07333 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSF1RP07333 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSF1RP07333 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CSF1RP07333 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.19■□□□□ 0.82
CSF1RP07333 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1RP07333 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CSF1RP07333 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1RP07333 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.19■□□□□ 0.82
CSF1RP07333 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.19■□□□□ 0.82
CSF1RP07333 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.19■□□□□ 0.82
CSF1RP07333 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1RP07333 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1RP07333 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1RP07333 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1RP07333 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1RP07333 CRB3P1-201ENST00000449338 276 ntBASIC20.19■□□□□ 0.82
CSF1RP07333 POU5F1P6-201ENST00000466990 990 ntBASIC20.19■□□□□ 0.82
CSF1RP07333 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.19■□□□□ 0.82
CSF1RP07333 AL365330.1-201ENST00000607459 531 ntBASIC20.19■□□□□ 0.82
CSF1RP07333 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1RP07333 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
CSF1RP07333 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1RP07333 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1RP07333 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1RP07333 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CSF1RP07333 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1RP07333 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CSF1RP07333 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1RP07333 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.19■□□□□ 0.82
CSF1RP07333 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1RP07333 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1RP07333 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSF1RP07333 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
CSF1RP07333 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CSF1RP07333 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSF1RP07333 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSF1RP07333 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSF1RP07333 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.18■□□□□ 0.82
CSF1RP07333 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.18■□□□□ 0.82
CSF1RP07333 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.18■□□□□ 0.82
CSF1RP07333 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSF1RP07333 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSF1RP07333 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.18■□□□□ 0.82
CSF1RP07333 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.18■□□□□ 0.82
CSF1RP07333 AL139010.1-201ENST00000454878 894 ntBASIC20.18■□□□□ 0.82
CSF1RP07333 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CSF1RP07333 SPDYE22P-201ENST00000582158 798 ntBASIC20.18■□□□□ 0.82
CSF1RP07333 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CSF1RP07333 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSF1RP07333 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.18■□□□□ 0.82
CSF1RP07333 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.18■□□□□ 0.82
CSF1RP07333 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.18■□□□□ 0.82
CSF1RP07333 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSF1RP07333 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.18■□□□□ 0.82
CSF1RP07333 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSF1RP07333 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.18■□□□□ 0.82
CSF1RP07333 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.18■□□□□ 0.82
CSF1RP07333 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CSF1RP07333 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.17■□□□□ 0.82
CSF1RP07333 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSF1RP07333 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSF1RP07333 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSF1RP07333 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms