Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
C1RP00736 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
C1RP00736 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.4■□□□□ 0.38
C1RP00736 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
C1RP00736 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
C1RP00736 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
C1RP00736 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.4■□□□□ 0.38
C1RP00736 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 AC009407.1-201ENST00000568958 598 ntBASIC17.4■□□□□ 0.38
C1RP00736 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.4■□□□□ 0.38
C1RP00736 AL133215.2-201ENST00000609242 977 ntBASIC17.4■□□□□ 0.38
C1RP00736 AL844908.2-201ENST00000609461 460 ntBASIC17.4■□□□□ 0.38
C1RP00736 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.4■□□□□ 0.38
C1RP00736 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.4■□□□□ 0.38
C1RP00736 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
C1RP00736 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
C1RP00736 AC009053.2-201ENST00000563701 2365 ntBASIC17.4■□□□□ 0.38
C1RP00736 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
C1RP00736 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.4■□□□□ 0.38
C1RP00736 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.4■□□□□ 0.38
C1RP00736 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.4■□□□□ 0.38
C1RP00736 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C1RP00736 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.4■□□□□ 0.38
C1RP00736 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.4■□□□□ 0.38
C1RP00736 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.39■□□□□ 0.38
C1RP00736 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
C1RP00736 CU639417.3-201ENST00000624240 1404 ntBASIC17.39■□□□□ 0.38
C1RP00736 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1RP00736 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1RP00736 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1RP00736 AC092053.1-201ENST00000605787 1936 ntBASIC17.39■□□□□ 0.37
C1RP00736 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.39■□□□□ 0.37
C1RP00736 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1RP00736 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.39■□□□□ 0.37
C1RP00736 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.39■□□□□ 0.37
C1RP00736 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1RP00736 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
C1RP00736 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1RP00736 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.39■□□□□ 0.37
C1RP00736 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.39■□□□□ 0.37
C1RP00736 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1RP00736 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1RP00736 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.39■□□□□ 0.37
C1RP00736 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1RP00736 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.39■□□□□ 0.37
C1RP00736 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.39■□□□□ 0.37
C1RP00736 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1RP00736 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.39■□□□□ 0.37
C1RP00736 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.39■□□□□ 0.37
C1RP00736 AC105021.1-202ENST00000570572 669 ntBASIC17.39■□□□□ 0.37
C1RP00736 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.39■□□□□ 0.37
C1RP00736 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
C1RP00736 AL589739.1-201ENST00000607720 493 ntBASIC17.39■□□□□ 0.37
C1RP00736 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C1RP00736 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.39■□□□□ 0.37
C1RP00736 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.39■□□□□ 0.37
C1RP00736 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1RP00736 AC080080.1-201ENST00000625121 2420 ntBASIC17.39■□□□□ 0.37
C1RP00736 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.39■□□□□ 0.37
C1RP00736 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.39■□□□□ 0.37
C1RP00736 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1RP00736 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.39■□□□□ 0.37
C1RP00736 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C1RP00736 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.39■□□□□ 0.37
C1RP00736 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C1RP00736 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.38■□□□□ 0.37
C1RP00736 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
C1RP00736 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
C1RP00736 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1RP00736 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.38■□□□□ 0.37
C1RP00736 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
C1RP00736 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.38■□□□□ 0.37
C1RP00736 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
C1RP00736 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.38■□□□□ 0.37
C1RP00736 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1RP00736 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1RP00736 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.38■□□□□ 0.37
C1RP00736 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1RP00736 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1RP00736 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1RP00736 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C1RP00736 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.38■□□□□ 0.37
C1RP00736 RPL37AP1-201ENST00000412502 279 ntBASIC17.38■□□□□ 0.37
C1RP00736 COX5BP8-201ENST00000416911 349 ntBASIC17.38■□□□□ 0.37
C1RP00736 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms