Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ABCA1O95477 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ABCA1O95477 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.94□□□□□ -0.18
ABCA1O95477 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ABCA1O95477 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
ABCA1O95477 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.94□□□□□ -0.18
ABCA1O95477 NME2P1-201ENST00000426182 414 ntBASIC13.94□□□□□ -0.18
ABCA1O95477 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.94□□□□□ -0.18
ABCA1O95477 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
ABCA1O95477 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
ABCA1O95477 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.94□□□□□ -0.18
ABCA1O95477 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
ABCA1O95477 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.94□□□□□ -0.18
ABCA1O95477 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ABCA1O95477 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.94□□□□□ -0.18
ABCA1O95477 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ABCA1O95477 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
ABCA1O95477 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 CU639417.3-201ENST00000624240 1404 ntBASIC13.94□□□□□ -0.18
ABCA1O95477 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.93□□□□□ -0.18
ABCA1O95477 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.93□□□□□ -0.18
ABCA1O95477 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
ABCA1O95477 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.93□□□□□ -0.18
ABCA1O95477 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.93□□□□□ -0.18
ABCA1O95477 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.93□□□□□ -0.18
ABCA1O95477 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.93□□□□□ -0.18
ABCA1O95477 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.93□□□□□ -0.18
ABCA1O95477 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.93□□□□□ -0.18
ABCA1O95477 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.93□□□□□ -0.18
ABCA1O95477 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
ABCA1O95477 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ABCA1O95477 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ABCA1O95477 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ABCA1O95477 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.93□□□□□ -0.18
ABCA1O95477 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.93□□□□□ -0.18
ABCA1O95477 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.93□□□□□ -0.18
ABCA1O95477 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.93□□□□□ -0.18
ABCA1O95477 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.93□□□□□ -0.18
ABCA1O95477 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.93□□□□□ -0.18
ABCA1O95477 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.93□□□□□ -0.18
ABCA1O95477 AC009118.2-201ENST00000613275 655 ntBASIC13.93□□□□□ -0.18
ABCA1O95477 AL138828.2-201ENST00000615812 383 ntBASIC13.93□□□□□ -0.18
ABCA1O95477 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.93□□□□□ -0.18
ABCA1O95477 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.93□□□□□ -0.18
ABCA1O95477 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ABCA1O95477 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.92□□□□□ -0.18
ABCA1O95477 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCA1O95477 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCA1O95477 UBALD1-205ENST00000590891 2641 ntBASIC13.92□□□□□ -0.18
ABCA1O95477 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCA1O95477 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCA1O95477 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCA1O95477 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ABCA1O95477 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
ABCA1O95477 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ABCA1O95477 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ABCA1O95477 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCA1O95477 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCA1O95477 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCA1O95477 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ABCA1O95477 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ABCA1O95477 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ABCA1O95477 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCA1O95477 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCA1O95477 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.92□□□□□ -0.18
ABCA1O95477 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ABCA1O95477 TREML5P-201ENST00000421694 576 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms