Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
TRIM3O75382 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM3O75382 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRIM3O75382 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM3O75382 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 AC005052.1-201ENST00000625181 2492 ntBASIC15.53■□□□□ 0.08
TRIM3O75382 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM3O75382 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM3O75382 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM3O75382 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRIM3O75382 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM3O75382 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM3O75382 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM3O75382 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM3O75382 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM3O75382 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM3O75382 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM3O75382 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM3O75382 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM3O75382 KRT18P13-201ENST00000400056 1290 ntBASIC15.52■□□□□ 0.08
TRIM3O75382 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM3O75382 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
TRIM3O75382 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRIM3O75382 AC107918.2-201ENST00000530817 355 ntBASIC15.52■□□□□ 0.08
TRIM3O75382 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM3O75382 AC092865.5-201ENST00000545435 363 ntBASIC15.52■□□□□ 0.08
TRIM3O75382 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM3O75382 ACTL9-202ENST00000612068 1252 ntBASIC15.52■□□□□ 0.08
TRIM3O75382 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
TRIM3O75382 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM3O75382 AC092865.6-201ENST00000642101 219 ntBASIC15.52■□□□□ 0.08
TRIM3O75382 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM3O75382 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM3O75382 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM3O75382 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM3O75382 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.07
TRIM3O75382 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM3O75382 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
TRIM3O75382 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRIM3O75382 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM3O75382 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM3O75382 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM3O75382 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM3O75382 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
TRIM3O75382 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM3O75382 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM3O75382 AC092850.2-201ENST00000623821 2697 ntBASIC15.51■□□□□ 0.07
TRIM3O75382 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM3O75382 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRIM3O75382 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM3O75382 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM3O75382 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM3O75382 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
TRIM3O75382 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIM3O75382 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 LINC02199-201ENST00000506655 2702 ntBASIC15.51■□□□□ 0.07
TRIM3O75382 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRIM3O75382 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM3O75382 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 YBX2P1-201ENST00000394192 760 ntBASIC15.51■□□□□ 0.07
TRIM3O75382 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM3O75382 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIM3O75382 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM3O75382 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
TRIM3O75382 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.51■□□□□ 0.07
TRIM3O75382 REXO1L3P-201ENST00000622202 1288 ntBASIC15.51■□□□□ 0.07
TRIM3O75382 AC004877.2-201ENST00000623941 599 ntBASIC15.51■□□□□ 0.07
TRIM3O75382 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM3O75382 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM3O75382 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM3O75382 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM3O75382 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM3O75382 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.51■□□□□ 0.07
TRIM3O75382 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM3O75382 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms