Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CHMP2AO43633 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
CHMP2AO43633 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CHMP2AO43633 NKILA-202ENST00000614771 2598 ntBASIC18.64■□□□□ 0.57
CHMP2AO43633 AGGF1P2-201ENST00000426656 2106 ntBASIC18.64■□□□□ 0.57
CHMP2AO43633 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2AO43633 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP2AO43633 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2AO43633 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2AO43633 GGT4P-201ENST00000623672 1708 ntBASIC18.64■□□□□ 0.57
CHMP2AO43633 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2AO43633 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2AO43633 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2AO43633 AL627223.1-201ENST00000416693 442 ntBASIC18.64■□□□□ 0.57
CHMP2AO43633 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.64■□□□□ 0.57
CHMP2AO43633 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.64■□□□□ 0.57
CHMP2AO43633 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP2AO43633 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP2AO43633 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.64■□□□□ 0.57
CHMP2AO43633 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP2AO43633 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2AO43633 KRT18P28-201ENST00000453838 1332 ntBASIC18.64■□□□□ 0.57
CHMP2AO43633 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHMP2AO43633 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2AO43633 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2AO43633 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHMP2AO43633 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2AO43633 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CHMP2AO43633 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2AO43633 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP2AO43633 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2AO43633 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHMP2AO43633 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP2AO43633 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2AO43633 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2AO43633 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CHMP2AO43633 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP2AO43633 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP2AO43633 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2AO43633 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2AO43633 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.63■□□□□ 0.57
CHMP2AO43633 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2AO43633 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP2AO43633 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP2AO43633 AC023141.5-201ENST00000458585 616 ntBASIC18.63■□□□□ 0.57
CHMP2AO43633 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2AO43633 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.63■□□□□ 0.57
CHMP2AO43633 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
CHMP2AO43633 AC027307.2-201ENST00000591252 911 ntBASIC18.63■□□□□ 0.57
CHMP2AO43633 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.63■□□□□ 0.57
CHMP2AO43633 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP2AO43633 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2AO43633 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2AO43633 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2AO43633 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2AO43633 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2AO43633 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2AO43633 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2AO43633 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CHMP2AO43633 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2AO43633 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP2AO43633 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP2AO43633 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2AO43633 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP2AO43633 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CHMP2AO43633 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHMP2AO43633 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 KRT18P32-201ENST00000424695 1287 ntBASIC18.62■□□□□ 0.57
CHMP2AO43633 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.62■□□□□ 0.57
CHMP2AO43633 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CHMP2AO43633 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.62■□□□□ 0.57
CHMP2AO43633 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHMP2AO43633 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.62■□□□□ 0.57
CHMP2AO43633 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP2AO43633 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP2AO43633 GPAA1P2-202ENST00000606848 1787 ntBASIC18.62■□□□□ 0.57
CHMP2AO43633 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP2AO43633 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP2AO43633 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP2AO43633 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP2AO43633 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms