Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.06■□□□□ 0.32
COCHO43405 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.06■□□□□ 0.32
COCHO43405 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.06■□□□□ 0.32
COCHO43405 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COCHO43405 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COCHO43405 INGX-202ENST00000489074 768 ntBASIC17.06■□□□□ 0.32
COCHO43405 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COCHO43405 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.06■□□□□ 0.32
COCHO43405 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.06■□□□□ 0.32
COCHO43405 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.06■□□□□ 0.32
COCHO43405 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.06■□□□□ 0.32
COCHO43405 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.06■□□□□ 0.32
COCHO43405 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COCHO43405 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COCHO43405 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.06■□□□□ 0.32
COCHO43405 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.06■□□□□ 0.32
COCHO43405 GGT3P-204ENST00000453783 1664 ntBASIC17.06■□□□□ 0.32
COCHO43405 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COCHO43405 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
COCHO43405 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.06■□□□□ 0.32
COCHO43405 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COCHO43405 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
COCHO43405 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
COCHO43405 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COCHO43405 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.05■□□□□ 0.32
COCHO43405 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
COCHO43405 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.05■□□□□ 0.32
COCHO43405 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COCHO43405 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COCHO43405 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.05■□□□□ 0.32
COCHO43405 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
COCHO43405 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COCHO43405 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COCHO43405 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
COCHO43405 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COCHO43405 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COCHO43405 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
COCHO43405 AL353705.2-201ENST00000428243 662 ntBASIC17.05■□□□□ 0.32
COCHO43405 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.05■□□□□ 0.32
COCHO43405 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.05■□□□□ 0.32
COCHO43405 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COCHO43405 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.05■□□□□ 0.32
COCHO43405 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
COCHO43405 AJ011932.1-201ENST00000621707 465 ntBASIC17.05■□□□□ 0.32
COCHO43405 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COCHO43405 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COCHO43405 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COCHO43405 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COCHO43405 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COCHO43405 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COCHO43405 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.05■□□□□ 0.32
COCHO43405 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
COCHO43405 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
COCHO43405 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
COCHO43405 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.05■□□□□ 0.32
COCHO43405 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.04■□□□□ 0.32
COCHO43405 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 AC106886.4-201ENST00000623557 2502 ntBASIC17.04■□□□□ 0.32
COCHO43405 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.04■□□□□ 0.32
COCHO43405 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
COCHO43405 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.04■□□□□ 0.32
COCHO43405 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.04■□□□□ 0.32
COCHO43405 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.04■□□□□ 0.32
COCHO43405 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
COCHO43405 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.04■□□□□ 0.32
COCHO43405 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 SPDYE12P-201ENST00000618416 771 ntBASIC17.04■□□□□ 0.32
COCHO43405 AC073592.8-201ENST00000624126 511 ntBASIC17.04■□□□□ 0.32
COCHO43405 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
COCHO43405 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.04■□□□□ 0.32
COCHO43405 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.04■□□□□ 0.32
COCHO43405 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.04■□□□□ 0.32
COCHO43405 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
COCHO43405 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COCHO43405 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COCHO43405 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COCHO43405 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.03■□□□□ 0.32
COCHO43405 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
COCHO43405 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.03■□□□□ 0.32
COCHO43405 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COCHO43405 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.03■□□□□ 0.32
COCHO43405 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.03■□□□□ 0.32
COCHO43405 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.03■□□□□ 0.32
COCHO43405 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms