Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CASQ2O14958 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CASQ2O14958 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
CASQ2O14958 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.8■□□□□ 0.12
CASQ2O14958 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.8■□□□□ 0.12
CASQ2O14958 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.8■□□□□ 0.12
CASQ2O14958 AL109923.1-201ENST00000618799 583 ntBASIC15.8■□□□□ 0.12
CASQ2O14958 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.8■□□□□ 0.12
CASQ2O14958 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CASQ2O14958 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CASQ2O14958 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASQ2O14958 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.8■□□□□ 0.12
CASQ2O14958 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CASQ2O14958 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.8■□□□□ 0.12
CASQ2O14958 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CASQ2O14958 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.79■□□□□ 0.12
CASQ2O14958 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.79■□□□□ 0.12
CASQ2O14958 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.79■□□□□ 0.12
CASQ2O14958 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CASQ2O14958 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CASQ2O14958 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CASQ2O14958 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.79■□□□□ 0.12
CASQ2O14958 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CASQ2O14958 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.79■□□□□ 0.12
CASQ2O14958 UBE2SP1-201ENST00000450587 669 ntBASIC15.79■□□□□ 0.12
CASQ2O14958 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CASQ2O14958 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.79■□□□□ 0.12
CASQ2O14958 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.79■□□□□ 0.12
CASQ2O14958 STK25P1-201ENST00000585406 838 ntBASIC15.79■□□□□ 0.12
CASQ2O14958 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 REXO1L10P-201ENST00000615707 1290 ntBASIC15.79■□□□□ 0.12
CASQ2O14958 REXO1L12P-201ENST00000622156 912 ntBASIC15.79■□□□□ 0.12
CASQ2O14958 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CASQ2O14958 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.79■□□□□ 0.12
CASQ2O14958 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.79■□□□□ 0.12
CASQ2O14958 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CASQ2O14958 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 AL049757.1-201ENST00000616842 1596 ntBASIC15.79■□□□□ 0.12
CASQ2O14958 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASQ2O14958 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CASQ2O14958 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.78■□□□□ 0.12
CASQ2O14958 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CASQ2O14958 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.78■□□□□ 0.12
CASQ2O14958 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CASQ2O14958 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.78■□□□□ 0.12
CASQ2O14958 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.78■□□□□ 0.12
CASQ2O14958 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 AC009947.2-201ENST00000444014 672 ntBASIC15.78■□□□□ 0.12
CASQ2O14958 AC068472.1-201ENST00000474589 881 ntBASIC15.78■□□□□ 0.12
CASQ2O14958 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CASQ2O14958 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.78■□□□□ 0.12
CASQ2O14958 RNA5SP413-201ENST00000516373 109 ntBASIC15.78■□□□□ 0.12
CASQ2O14958 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CASQ2O14958 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.78■□□□□ 0.12
CASQ2O14958 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CASQ2O14958 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.78■□□□□ 0.12
CASQ2O14958 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms