Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.7■□□□□ 0.42
O00370 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.7■□□□□ 0.42
O00370 AC004832.2-201ENST00000426397 482 ntBASIC17.7■□□□□ 0.42
O00370 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.7■□□□□ 0.42
O00370 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.7■□□□□ 0.42
O00370 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
O00370 AC002347.1-201ENST00000569543 541 ntBASIC17.7■□□□□ 0.42
O00370 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
O00370 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.7■□□□□ 0.42
O00370 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.7■□□□□ 0.42
O00370 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
O00370 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
O00370 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
O00370 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
O00370 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
O00370 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.7■□□□□ 0.42
O00370 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
O00370 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
O00370 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
O00370 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
O00370 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
O00370 AL031731.1-201ENST00000642131 2094 ntBASIC17.7■□□□□ 0.42
O00370 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.7■□□□□ 0.42
O00370 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
O00370 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
O00370 LINC02199-201ENST00000506655 2702 ntBASIC17.7■□□□□ 0.42
O00370 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.7■□□□□ 0.42
O00370 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
O00370 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
O00370 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
O00370 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.69■□□□□ 0.42
O00370 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
O00370 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
O00370 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.69■□□□□ 0.42
O00370 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.69■□□□□ 0.42
O00370 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.69■□□□□ 0.42
O00370 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.69■□□□□ 0.42
O00370 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.69■□□□□ 0.42
O00370 AC109635.5-201ENST00000533593 962 ntBASIC17.69■□□□□ 0.42
O00370 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.69■□□□□ 0.42
O00370 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.69■□□□□ 0.42
O00370 AP002472.1-201ENST00000577490 586 ntBASIC17.69■□□□□ 0.42
O00370 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 AL009183.1-201ENST00000603760 355 ntBASIC17.69■□□□□ 0.42
O00370 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
O00370 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
O00370 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
O00370 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.69■□□□□ 0.42
O00370 GGT4P-201ENST00000623672 1708 ntBASIC17.69■□□□□ 0.42
O00370 AC008741.2-201ENST00000612792 3115 ntBASIC17.69■□□□□ 0.42
O00370 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
O00370 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
O00370 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.68■□□□□ 0.42
O00370 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
O00370 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.68■□□□□ 0.42
O00370 PMS2P4-201ENST00000412466 1052 ntBASIC17.68■□□□□ 0.42
O00370 MCCD1P2-201ENST00000423228 335 ntBASIC17.68■□□□□ 0.42
O00370 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.68■□□□□ 0.42
O00370 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.68■□□□□ 0.42
O00370 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
O00370 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.68■□□□□ 0.42
O00370 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.68■□□□□ 0.42
O00370 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.68■□□□□ 0.42
O00370 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
O00370 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
O00370 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
O00370 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms