Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 LINC02447-202ENST00000501888 2146 ntBASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC096633.1-201ENST00000422446 749 ntBASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PVRIG2P-201ENST00000435460 978 ntBASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC083880.1-201ENST00000608266 535 ntBASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AL139011.1-202ENST00000642063 584 ntBASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SSR4P1-203ENST00000599569 2260 ntBASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CDC14C-201ENST00000428251 1719 ntBASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC026185.1-201ENST00000445748 174 ntBASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC073195.1-201ENST00000607241 877 ntBASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 MIR6821-201ENST00000617625 74 ntBASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 KRT89P-201ENST00000620027 1478 ntBASIC10.53□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms