Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 AL355075.4-201ENST00000554988 638 ntBASIC12.2□□□□□ -0.46
SMKR1H3BMG3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 AC141257.4-201ENST00000634557 245 ntBASIC12.2□□□□□ -0.46
SMKR1H3BMG3 AC136944.6-201ENST00000634818 245 ntBASIC12.2□□□□□ -0.46
SMKR1H3BMG3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SMKR1H3BMG3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 OR2I1P-210ENST00000642037 4691 ntBASIC12.19□□□□□ -0.46
SMKR1H3BMG3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 SBF1P1-201ENST00000444527 5631 ntBASIC12.19□□□□□ -0.46
SMKR1H3BMG3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 FAM8A6P-201ENST00000407496 1135 ntBASIC12.19□□□□□ -0.46
SMKR1H3BMG3 SPDYE15P-201ENST00000424157 909 ntBASIC12.19□□□□□ -0.46
SMKR1H3BMG3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 AC092597.1-201ENST00000487352 616 ntBASIC12.19□□□□□ -0.46
SMKR1H3BMG3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SMKR1H3BMG3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SMKR1H3BMG3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SMKR1H3BMG3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SMKR1H3BMG3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
SMKR1H3BMG3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SMKR1H3BMG3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.18□□□□□ -0.46
SMKR1H3BMG3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SMKR1H3BMG3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SMKR1H3BMG3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SMKR1H3BMG3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.18□□□□□ -0.46
SMKR1H3BMG3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SMKR1H3BMG3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SMKR1H3BMG3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SMKR1H3BMG3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms