Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3BA6NDS4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 PCDHB18P-201ENST00000524813 2368 ntBASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 TSSK5P-201ENST00000423978 907 ntBASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TBC1D3BA6NDS4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 AC022144.1-201ENST00000602255 1580 ntBASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 MRPS18AP1-201ENST00000414458 589 ntBASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 AC005034.1-201ENST00000426657 489 ntBASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 SERBP1P5-201ENST00000510079 1181 ntBASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 RN7SL828P-201ENST00000607615 303 ntBASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 AL589739.1-201ENST00000607720 493 ntBASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 AC009118.2-201ENST00000613275 655 ntBASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 AC005332.8-201ENST00000622750 2735 ntBASIC16.77■□□□□ 0.28
TBC1D3BA6NDS4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.77■□□□□ 0.27
TBC1D3BA6NDS4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TBC1D3BA6NDS4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TBC1D3BA6NDS4 CETN4P-206ENST00000642099 2168 ntBASIC16.77■□□□□ 0.27
TBC1D3BA6NDS4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
TBC1D3BA6NDS4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.77■□□□□ 0.27
TBC1D3BA6NDS4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TBC1D3BA6NDS4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.76■□□□□ 0.27
TBC1D3BA6NDS4 AL645728.1-201ENST00000366221 2101 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms