Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 AL671710.1-201ENST00000610245 2349 ntBASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 AP002414.1-201ENST00000391405 1147 ntBASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 AC117947.1-201ENST00000427448 529 ntBASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 TSPY22P-201ENST00000427496 604 ntBASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 NUS1P1-201ENST00000446295 882 ntBASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 SIGLEC30P-201ENST00000455569 941 ntBASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 AP005117.1-202ENST00000581724 1908 ntBASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV18A0A075B6X5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV18A0A075B6X5 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV18A0A075B6X5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
TRAV18A0A075B6X5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV18A0A075B6X5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV18A0A075B6X5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.33□□□□□ -0.11
TRAV18A0A075B6X5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV18A0A075B6X5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.33□□□□□ -0.11
TRAV18A0A075B6X5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV18A0A075B6X5 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 TSPY5P-201ENST00000426936 936 ntBASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV18A0A075B6X5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms