Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 ADH5P3-201ENST00000433842 1137 ntBASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 AC106028.4-201ENST00000614509 607 ntBASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 AC093028.1-201ENST00000622998 982 ntBASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 PCDHA1-201ENST00000378133 2726 ntBASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 AC026691.1-201ENST00000602502 2017 ntBASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 FAM86C2P-203ENST00000528684 1004 ntBASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 AC092919.2-201ENST00000623631 1645 ntBASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 AC011270.2-201ENST00000624293 2550 ntBASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA6Q9Y5G7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 AC078925.2-201ENST00000624013 1973 ntBASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 AC140658.5-201ENST00000438532 169 ntBASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 AC023141.5-201ENST00000458585 616 ntBASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 AC025678.2-201ENST00000562061 970 ntBASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 AC004449.1-201ENST00000564240 433 ntBASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGA6Q9Y5G7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 AC006449.5-201ENST00000610658 2098 ntBASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms