Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 RCN1P2-201ENST00000398357 915 ntBASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 DUSP5P1-201ENST00000441325 1139 ntBASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
R3HCC1Q9Y3T6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 AC103564.2-201ENST00000432853 1299 ntBASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 AC092053.1-201ENST00000605787 1936 ntBASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
R3HCC1Q9Y3T6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
R3HCC1Q9Y3T6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms