Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 AC092850.2-201ENST00000623821 2697 ntBASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 RCN1P2-201ENST00000398357 915 ntBASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 BNIP3P18-201ENST00000593976 575 ntBASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
UBE2D4Q9Y2X8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 AP005117.1-202ENST00000581724 1908 ntBASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 POU5F1P6-201ENST00000466990 990 ntBASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 AC010331.1-201ENST00000611423 582 ntBASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 AC073592.4-201ENST00000623827 446 ntBASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 AL590326.2-201ENST00000625139 305 ntBASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
UBE2D4Q9Y2X8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms