Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1Q9Y2A7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 HLA-H-201ENST00000383620 1096 ntBASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 TSPY16P-201ENST00000449843 468 ntBASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 KRT8P39-201ENST00000396270 1433 ntBASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
NCKAP1Q9Y2A7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 AL023806.1-201ENST00000603994 1649 ntBASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 SPTSSB-204ENST00000617024 1292 ntBASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
NCKAP1Q9Y2A7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 TERF1P3-201ENST00000505638 1227 ntBASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 AC027369.6-201ENST00000525520 931 ntBASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 AC190387.1-201ENST00000551683 408 ntBASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NCKAP1Q9Y2A7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms