Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 AL732292.2-201ENST00000609649 430 ntBASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HHLA3Q9XRX5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 SIGLEC16-201ENST00000599858 1437 ntBASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 AC106795.1-205ENST00000512851 1056 ntBASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 MTDHP3-201ENST00000594186 672 ntBASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 AP001269.4-201ENST00000609611 512 ntBASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.21□□□□□ -0.45
HHLA3Q9XRX5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 AC079776.2-201ENST00000641154 1609 ntBASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HHLA3Q9XRX5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HHLA3Q9XRX5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms