Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 AC243562.1-201ENST00000560672 389 ntBASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS5Q9UPZ3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 MRPS18AP1-201ENST00000414458 589 ntBASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 AC004890.2-204ENST00000481968 304 ntBASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 AC026150.2-201ENST00000564693 1156 ntBASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 AC004233.3-201ENST00000607794 1269 ntBASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 AC017083.2-201ENST00000608069 979 ntBASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 ACTL9-202ENST00000612068 1252 ntBASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS5Q9UPZ3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 SPDYE7P-202ENST00000420373 878 ntBASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 AP002490.2-201ENST00000524791 560 ntBASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 AL671710.1-201ENST00000610245 2349 ntBASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS5Q9UPZ3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS5Q9UPZ3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms