Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 PCDHB17P-201ENST00000539533 2393 ntBASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 AC104596.2-201ENST00000512793 793 ntBASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 MIR4538-201ENST00000581377 78 ntBASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 AC025048.3-201ENST00000590609 569 ntBASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 AC010319.3-201ENST00000597028 470 ntBASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 AC005702.4-201ENST00000618393 416 ntBASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNRF3Q9ULT6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNRF3Q9ULT6 AC092068.3-201ENST00000587894 2016 ntBASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 KRT43P-201ENST00000434019 910 ntBASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNRF3Q9ULT6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms