Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM248Q9NWD8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.93■□□□□ 0.3
TMEM248Q9NWD8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 AC004461.1-201ENST00000412461 403 ntBASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 AL592309.1-201ENST00000443127 649 ntBASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TMEM248Q9NWD8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 AC105233.2-201ENST00000523697 349 ntBASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 AF228730.5-201ENST00000530288 346 ntBASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 AC006538.3-201ENST00000612495 578 ntBASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 AL691403.2-201ENST00000618460 490 ntBASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TMEM248Q9NWD8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 MIR346-201ENST00000362234 95 ntBASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 DNAJB3-202ENST00000449667 1266 ntBASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 AC069335.1-201ENST00000489972 472 ntBASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 IGHV3-62-201ENST00000520057 340 ntBASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 AC004835.2-201ENST00000603762 682 ntBASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 AC084121.4-201ENST00000641598 221 ntBASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 AC079781.4-201ENST00000641908 219 ntBASIC16.9■□□□□ 0.3
TMEM248Q9NWD8 AF228730.8-201ENST00000642140 221 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms