Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 TFAMP1-201ENST00000412727 736 ntBASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 FAM86C2P-203ENST00000528684 1004 ntBASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 AC092364.2-201ENST00000596710 2692 ntBASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 MIR3687-2-201ENST00000577708 61 ntBASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 MIR3687-1-201ENST00000614492 61 ntBASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 AC073439.1-201ENST00000624121 1774 ntBASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.16■□□□□ 0.82
ECHDC1Q9NTX5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 CEND1P1-201ENST00000451006 455 ntBASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 AC243562.1-201ENST00000560672 389 ntBASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 MIR4469-201ENST00000583919 79 ntBASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 AC026120.1-201ENST00000611536 926 ntBASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 AC006449.5-201ENST00000610658 2098 ntBASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ECHDC1Q9NTX5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.14■□□□□ 0.82
ECHDC1Q9NTX5 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms