Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 AC096582.2-201ENST00000510860 516 ntBASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 AL358472.4-201ENST00000633140 710 ntBASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHB16Q9NRJ7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 HLA-J-202ENST00000469281 1241 ntBASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHB16Q9NRJ7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PCDHB16Q9NRJ7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB16Q9NRJ7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHB16Q9NRJ7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHB16Q9NRJ7 NSUN5P1-202ENST00000421140 1535 ntBASIC14.51□□□□□ -0.09
PCDHB16Q9NRJ7 NSUN5P2-203ENST00000457352 1529 ntBASIC14.51□□□□□ -0.09
PCDHB16Q9NRJ7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB16Q9NRJ7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB16Q9NRJ7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB16Q9NRJ7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PCDHB16Q9NRJ7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
PCDHB16Q9NRJ7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHB16Q9NRJ7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHB16Q9NRJ7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms