Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 TSEN15P1-201ENST00000423257 515 ntBASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 KRT18P34-201ENST00000488218 1270 ntBASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 FLJ38576-201ENST00000623820 2459 ntBASIC19.22■□□□□ 0.67
VAT1LQ9HCJ6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 AC023141.5-201ENST00000458585 616 ntBASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 AC109322.1-201ENST00000524499 1264 ntBASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 AL139011.1-202ENST00000642063 584 ntBASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VAT1LQ9HCJ6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
VAT1LQ9HCJ6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 AC093028.1-201ENST00000622998 982 ntBASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms