Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 SLC25A3P1-201ENST00000443844 931 ntBASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 STK25P1-201ENST00000585406 838 ntBASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 AL135999.2-201ENST00000622438 1686 ntBASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 AL049757.1-201ENST00000616842 1596 ntBASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 FUT8-AS1-201ENST00000621019 1521 ntBASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SND1-IT1Q9HBX3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 KRT8P10-201ENST00000450021 1447 ntBASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 Z83836.1-201ENST00000624605 1642 ntBASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 GXYLT1P3-201ENST00000453058 1193 ntBASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SND1-IT1Q9HBX3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms