Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ELL3Q9HB65 AC092364.2-201ENST00000596710 2692 ntBASIC14.58□□□□□ -0.08
ELL3Q9HB65 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.58□□□□□ -0.08
ELL3Q9HB65 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
ELL3Q9HB65 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 KRT16P4-201ENST00000453883 522 ntBASIC14.57□□□□□ -0.08
ELL3Q9HB65 AC132008.2-207ENST00000454517 770 ntBASIC14.57□□□□□ -0.08
ELL3Q9HB65 UNC93B7-201ENST00000509439 705 ntBASIC14.57□□□□□ -0.08
ELL3Q9HB65 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 AP001269.4-201ENST00000609611 512 ntBASIC14.57□□□□□ -0.08
ELL3Q9HB65 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 AC006449.5-201ENST00000610658 2098 ntBASIC14.57□□□□□ -0.08
ELL3Q9HB65 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 AL021920.2-201ENST00000624828 1351 ntBASIC14.57□□□□□ -0.08
ELL3Q9HB65 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.57□□□□□ -0.08
ELL3Q9HB65 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ELL3Q9HB65 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 PMPCAP1-201ENST00000508114 1576 ntBASIC14.56□□□□□ -0.08
ELL3Q9HB65 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 AC148477.5-201ENST00000625164 1645 ntBASIC14.56□□□□□ -0.08
ELL3Q9HB65 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.56□□□□□ -0.08
ELL3Q9HB65 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 HYMAI-201ENST00000635591 3347 ntBASIC14.56□□□□□ -0.08
ELL3Q9HB65 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 HLA-A-202ENST00000376806 1854 ntBASIC14.56□□□□□ -0.08
ELL3Q9HB65 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.56□□□□□ -0.08
ELL3Q9HB65 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ELL3Q9HB65 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms