Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 AC007950.2-201ENST00000615045 2347 ntBASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPF3BQ9BZI7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 AL139384.1-201ENST00000612143 3047 ntBASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 KRT18P67-201ENST00000432816 1264 ntBASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 AP002469.2-201ENST00000531724 424 ntBASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 AC105339.3-201ENST00000560043 636 ntBASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 BX640515.1-201ENST00000617215 977 ntBASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 AL353732.1-201ENST00000569618 1459 ntBASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.85■□□□□ 0.77
UPF3BQ9BZI7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 MTHFR-217ENST00000641820 1569 ntBASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 SLC25A6P4-201ENST00000586535 553 ntBASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 AL049840.3-201ENST00000602669 611 ntBASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 GGTLC5P-201ENST00000617623 998 ntBASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.84■□□□□ 0.77
UPF3BQ9BZI7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 AC108073.2-201ENST00000464002 357 ntBASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 AF186996.4-201ENST00000467186 377 ntBASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 AC120114.3-201ENST00000611923 658 ntBASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.83■□□□□ 0.77
UPF3BQ9BZI7 MIR1199-201ENST00000621445 119 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms