Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 AC136632.2-201ENST00000512891 861 ntBASIC18.9■□□□□ 0.62
CCDC94Q9BW85 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 AL139424.1-201ENST00000607572 797 ntBASIC18.9■□□□□ 0.62
CCDC94Q9BW85 AC005593.1-201ENST00000624894 515 ntBASIC18.9■□□□□ 0.62
CCDC94Q9BW85 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 ZNF259P1-201ENST00000407656 1365 ntBASIC18.9■□□□□ 0.62
CCDC94Q9BW85 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC94Q9BW85 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC94Q9BW85 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.89■□□□□ 0.62
CCDC94Q9BW85 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC94Q9BW85 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC94Q9BW85 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 AC073621.1-201ENST00000392730 636 ntBASIC18.89■□□□□ 0.61
CCDC94Q9BW85 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 AC106730.1-201ENST00000566722 1090 ntBASIC18.89■□□□□ 0.61
CCDC94Q9BW85 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 AC117500.6-201ENST00000624871 588 ntBASIC18.89■□□□□ 0.61
CCDC94Q9BW85 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC94Q9BW85 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 ELK2BP-201ENST00000415014 1224 ntBASIC18.88■□□□□ 0.61
CCDC94Q9BW85 LINC00982-205ENST00000420957 435 ntBASIC18.88■□□□□ 0.61
CCDC94Q9BW85 RNA5SP415-201ENST00000517246 115 ntBASIC18.88■□□□□ 0.61
CCDC94Q9BW85 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 AC145285.3-201ENST00000564603 959 ntBASIC18.88■□□□□ 0.61
CCDC94Q9BW85 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC94Q9BW85 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms