Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMOQ99835 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.35■□□□□ 0.37
SMOQ99835 AP001059.3-201ENST00000619053 235 ntBASIC17.35■□□□□ 0.37
SMOQ99835 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMOQ99835 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMOQ99835 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMOQ99835 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMOQ99835 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.35■□□□□ 0.37
SMOQ99835 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMOQ99835 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMOQ99835 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.35■□□□□ 0.37
SMOQ99835 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.35■□□□□ 0.37
SMOQ99835 ALOX12P2-203ENST00000570921 1945 ntBASIC17.35■□□□□ 0.37
SMOQ99835 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.35■□□□□ 0.37
SMOQ99835 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SMOQ99835 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SMOQ99835 PRORSD1P-202ENST00000563365 2154 ntBASIC17.35■□□□□ 0.37
SMOQ99835 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMOQ99835 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMOQ99835 AC009053.2-201ENST00000563701 2365 ntBASIC17.35■□□□□ 0.37
SMOQ99835 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMOQ99835 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMOQ99835 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMOQ99835 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMOQ99835 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMOQ99835 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMOQ99835 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.34■□□□□ 0.37
SMOQ99835 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMOQ99835 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SMOQ99835 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMOQ99835 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
SMOQ99835 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMOQ99835 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMOQ99835 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
SMOQ99835 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.34■□□□□ 0.37
SMOQ99835 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMOQ99835 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.34■□□□□ 0.37
SMOQ99835 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.34■□□□□ 0.37
SMOQ99835 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.34■□□□□ 0.37
SMOQ99835 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMOQ99835 AL512356.2-201ENST00000546955 174 ntBASIC17.34■□□□□ 0.37
SMOQ99835 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SMOQ99835 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMOQ99835 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
SMOQ99835 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.34■□□□□ 0.37
SMOQ99835 SPTSSB-204ENST00000617024 1292 ntBASIC17.34■□□□□ 0.37
SMOQ99835 LINC01144-201ENST00000626198 1710 ntBASIC17.34■□□□□ 0.37
SMOQ99835 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMOQ99835 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.34■□□□□ 0.37
SMOQ99835 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SMOQ99835 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
SMOQ99835 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMOQ99835 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMOQ99835 AC005052.1-201ENST00000625181 2492 ntBASIC17.33■□□□□ 0.37
SMOQ99835 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMOQ99835 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMOQ99835 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.33■□□□□ 0.37
SMOQ99835 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMOQ99835 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMOQ99835 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.33■□□□□ 0.37
SMOQ99835 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMOQ99835 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.33■□□□□ 0.37
SMOQ99835 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SMOQ99835 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SMOQ99835 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMOQ99835 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SMOQ99835 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SMOQ99835 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.33■□□□□ 0.37
SMOQ99835 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMOQ99835 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.33■□□□□ 0.37
SMOQ99835 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SMOQ99835 AP3S2-216ENST00000617003 1561 ntBASIC17.33■□□□□ 0.37
SMOQ99835 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMOQ99835 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SMOQ99835 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.33■□□□□ 0.37
SMOQ99835 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SMOQ99835 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMOQ99835 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SMOQ99835 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.33■□□□□ 0.36
SMOQ99835 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMOQ99835 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SMOQ99835 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.33■□□□□ 0.36
SMOQ99835 AL645939.2-201ENST00000427340 991 ntBASIC17.33■□□□□ 0.36
SMOQ99835 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.33■□□□□ 0.36
SMOQ99835 AC027796.2-201ENST00000575326 344 ntBASIC17.33■□□□□ 0.36
SMOQ99835 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.33■□□□□ 0.36
SMOQ99835 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.33■□□□□ 0.36
SMOQ99835 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.33■□□□□ 0.36
SMOQ99835 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.33■□□□□ 0.36
SMOQ99835 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.33■□□□□ 0.36
SMOQ99835 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMOQ99835 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SMOQ99835 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.33■□□□□ 0.36
SMOQ99835 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMOQ99835 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SMOQ99835 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.33■□□□□ 0.36
SMOQ99835 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMOQ99835 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMOQ99835 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMOQ99835 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms