Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
RNF2Q99496 MIR3652-201ENST00000579335 131 ntBASIC13.31□□□□□ -0.28
RNF2Q99496 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF2Q99496 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.31□□□□□ -0.28
RNF2Q99496 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.31□□□□□ -0.28
RNF2Q99496 AC114341.1-201ENST00000618070 349 ntBASIC13.31□□□□□ -0.28
RNF2Q99496 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.31□□□□□ -0.28
RNF2Q99496 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.31□□□□□ -0.28
RNF2Q99496 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 AL049757.1-201ENST00000616842 1596 ntBASIC13.31□□□□□ -0.28
RNF2Q99496 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.31□□□□□ -0.28
RNF2Q99496 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.31□□□□□ -0.28
RNF2Q99496 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF2Q99496 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RNF2Q99496 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
RNF2Q99496 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 INTS4P1-201ENST00000438455 1935 ntBASIC13.31□□□□□ -0.28
RNF2Q99496 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.31□□□□□ -0.28
RNF2Q99496 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.3□□□□□ -0.28
RNF2Q99496 KRT8P10-201ENST00000450021 1447 ntBASIC13.3□□□□□ -0.28
RNF2Q99496 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.3□□□□□ -0.28
RNF2Q99496 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF2Q99496 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RNF2Q99496 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.3□□□□□ -0.28
RNF2Q99496 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RNF2Q99496 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
RNF2Q99496 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RNF2Q99496 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RNF2Q99496 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
RNF2Q99496 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF2Q99496 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.3□□□□□ -0.28
RNF2Q99496 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RNF2Q99496 FOSL1P1-201ENST00000511041 816 ntBASIC13.3□□□□□ -0.28
RNF2Q99496 STK19B-204ENST00000512515 211 ntBASIC13.3□□□□□ -0.28
RNF2Q99496 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.3□□□□□ -0.28
RNF2Q99496 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.3□□□□□ -0.28
RNF2Q99496 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.3□□□□□ -0.28
RNF2Q99496 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF2Q99496 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF2Q99496 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.3□□□□□ -0.28
RNF2Q99496 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.3□□□□□ -0.28
RNF2Q99496 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.3□□□□□ -0.28
RNF2Q99496 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.3□□□□□ -0.28
RNF2Q99496 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.3□□□□□ -0.28
RNF2Q99496 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RNF2Q99496 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF2Q99496 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
RNF2Q99496 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.29□□□□□ -0.28
RNF2Q99496 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
RNF2Q99496 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 AL135999.2-201ENST00000622438 1686 ntBASIC13.29□□□□□ -0.28
RNF2Q99496 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.29□□□□□ -0.28
RNF2Q99496 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RNF2Q99496 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.29□□□□□ -0.28
RNF2Q99496 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.29□□□□□ -0.28
RNF2Q99496 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.29□□□□□ -0.28
RNF2Q99496 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.29□□□□□ -0.28
RNF2Q99496 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.29□□□□□ -0.28
RNF2Q99496 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms