Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.79■□□□□ 0.12
BBS4Q96RK4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 AC010654.1-201ENST00000615722 808 ntBASIC15.79■□□□□ 0.12
BBS4Q96RK4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 AC116407.3-201ENST00000623905 1129 ntBASIC15.79■□□□□ 0.12
BBS4Q96RK4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BBS4Q96RK4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
BBS4Q96RK4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BBS4Q96RK4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BBS4Q96RK4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BBS4Q96RK4 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.78■□□□□ 0.12
BBS4Q96RK4 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 ALOX12P2-203ENST00000570921 1945 ntBASIC15.78■□□□□ 0.12
BBS4Q96RK4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BBS4Q96RK4 KRT8P39-201ENST00000396270 1433 ntBASIC15.78■□□□□ 0.12
BBS4Q96RK4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BBS4Q96RK4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BBS4Q96RK4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
BBS4Q96RK4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BBS4Q96RK4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
BBS4Q96RK4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BBS4Q96RK4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.78■□□□□ 0.12
BBS4Q96RK4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BBS4Q96RK4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BBS4Q96RK4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BBS4Q96RK4 AL671710.1-201ENST00000610245 2349 ntBASIC15.78■□□□□ 0.12
BBS4Q96RK4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.78■□□□□ 0.12
BBS4Q96RK4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
BBS4Q96RK4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BBS4Q96RK4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.77■□□□□ 0.12
BBS4Q96RK4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
BBS4Q96RK4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
BBS4Q96RK4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
BBS4Q96RK4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BBS4Q96RK4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.77■□□□□ 0.12
BBS4Q96RK4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BBS4Q96RK4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BBS4Q96RK4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BBS4Q96RK4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BBS4Q96RK4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
BBS4Q96RK4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
BBS4Q96RK4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.77■□□□□ 0.12
BBS4Q96RK4 PRSS29P-201ENST00000440800 595 ntBASIC15.77■□□□□ 0.12
BBS4Q96RK4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.77■□□□□ 0.12
BBS4Q96RK4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.77■□□□□ 0.12
BBS4Q96RK4 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.77■□□□□ 0.12
BBS4Q96RK4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms