Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CALR3Q96L12 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 PI4KAP1-204ENST00000612579 1703 ntBASIC17.61■□□□□ 0.41
CALR3Q96L12 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.61■□□□□ 0.41
CALR3Q96L12 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.61■□□□□ 0.41
CALR3Q96L12 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CALR3Q96L12 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.61■□□□□ 0.41
CALR3Q96L12 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.61■□□□□ 0.41
CALR3Q96L12 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.61■□□□□ 0.41
CALR3Q96L12 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CALR3Q96L12 MTDHP4-201ENST00000600287 670 ntBASIC17.61■□□□□ 0.41
CALR3Q96L12 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
CALR3Q96L12 AC010654.1-201ENST00000615722 808 ntBASIC17.61■□□□□ 0.41
CALR3Q96L12 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.61■□□□□ 0.41
CALR3Q96L12 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CALR3Q96L12 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.61■□□□□ 0.41
CALR3Q96L12 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.61■□□□□ 0.41
CALR3Q96L12 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.61■□□□□ 0.41
CALR3Q96L12 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CALR3Q96L12 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.61■□□□□ 0.41
CALR3Q96L12 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.61■□□□□ 0.41
CALR3Q96L12 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CALR3Q96L12 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.61■□□□□ 0.41
CALR3Q96L12 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.61■□□□□ 0.41
CALR3Q96L12 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CALR3Q96L12 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.61■□□□□ 0.41
CALR3Q96L12 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CALR3Q96L12 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CALR3Q96L12 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CALR3Q96L12 AL603832.2-201ENST00000566195 2125 ntBASIC17.6■□□□□ 0.41
CALR3Q96L12 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CALR3Q96L12 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
CALR3Q96L12 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CALR3Q96L12 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CALR3Q96L12 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CALR3Q96L12 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CALR3Q96L12 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CALR3Q96L12 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.6■□□□□ 0.41
CALR3Q96L12 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CALR3Q96L12 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.6■□□□□ 0.41
CALR3Q96L12 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.6■□□□□ 0.41
CALR3Q96L12 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.6■□□□□ 0.41
CALR3Q96L12 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.6■□□□□ 0.41
CALR3Q96L12 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CALR3Q96L12 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.6■□□□□ 0.41
CALR3Q96L12 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.6■□□□□ 0.41
CALR3Q96L12 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CALR3Q96L12 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CALR3Q96L12 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CALR3Q96L12 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.6■□□□□ 0.41
CALR3Q96L12 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CALR3Q96L12 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CALR3Q96L12 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.6■□□□□ 0.41
CALR3Q96L12 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CALR3Q96L12 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC17.6■□□□□ 0.41
CALR3Q96L12 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.6■□□□□ 0.41
CALR3Q96L12 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.6■□□□□ 0.41
CALR3Q96L12 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CALR3Q96L12 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.59■□□□□ 0.41
CALR3Q96L12 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CALR3Q96L12 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CALR3Q96L12 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CALR3Q96L12 AC104640.1-201ENST00000562617 2109 ntBASIC17.59■□□□□ 0.41
CALR3Q96L12 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CALR3Q96L12 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.59■□□□□ 0.41
CALR3Q96L12 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CALR3Q96L12 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CALR3Q96L12 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
CALR3Q96L12 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CALR3Q96L12 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CALR3Q96L12 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CALR3Q96L12 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CALR3Q96L12 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CALR3Q96L12 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.59■□□□□ 0.41
CALR3Q96L12 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.59■□□□□ 0.41
CALR3Q96L12 LAGE3P1-201ENST00000425356 484 ntBASIC17.59■□□□□ 0.41
CALR3Q96L12 FGFR3P6-201ENST00000457012 610 ntBASIC17.59■□□□□ 0.41
CALR3Q96L12 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.59■□□□□ 0.41
CALR3Q96L12 FOSL1P1-201ENST00000511041 816 ntBASIC17.59■□□□□ 0.41
CALR3Q96L12 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.59■□□□□ 0.41
CALR3Q96L12 AC079416.2-201ENST00000625035 1193 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms